RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 OCIAD1Q9NX40 245 aa10.42□□□□□ -0.74
PHGDH-201ENST00000369407 NAGKQ9UJ70 344 aa10.42□□□□□ -0.74
PHGDH-201ENST00000369407 TRAPPC1Q9Y5R8 145 aa10.42□□□□□ -0.74
PHGDH-201ENST00000369407 M0QZ24 198 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 PDGFBP01127 241 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-201ENST00000369407 IGLV2-14P01704 120 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 RFPL3SP0C7P2 107 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 C1QTNF9P0C862 333 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 S100GP29377 79 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 DSCR4P56555 118 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-201ENST00000369407 SERF2P84101 59 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 ZNF585BQ52M93 769 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 GCSAMLQ5JQS6 135 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 KRASP01116 189 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 PDLIM4P50479 330 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 CLDN15P56746 228 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 FFAR4Q5NUL3 377 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 TGIF2LYQ8IUE0 185 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 MKXQ8IYA7 352 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 ZNF114Q8NC26 417 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 IMMP2LQ96T52 175 aa10.41□□□□□ -0.74
PHGDH-201ENST00000369407 TRAV24A0A0B4J272 114 aa10.4□□□□□ -0.74
PHGDH-201ENST00000369407 A0A1W2PQM1 296 aa10.4□□□□□ -0.74
PHGDH-201ENST00000369407 BRS3P32247 399 aa10.4□□□□□ -0.74
PHGDH-201ENST00000369407 PCOLCEQ15113 449 aa10.4□□□□□ -0.74
PHGDH-201ENST00000369407 WIPI1Q5MNZ9 446 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-201ENST00000369407 WDR74Q6RFH5 385 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-201ENST00000369407 PRRG4Q9BZD6 226 aa10.4□□□□□ -0.74
PHGDH-201ENST00000369407 OR2J1Q9GZK6 312 aa10.4□□□□□ -0.74
PHGDH-201ENST00000369407 RHBDL1O75783 438 aa10.4□□□□□ -0.74
PHGDH-201ENST00000369407 RAC1P63000 192 aa10.4□□□□□ -0.74
PHGDH-201ENST00000369407 CCL7P80098 99 aa10.4□□□□□ -0.74
PHGDH-201ENST00000369407 CPT1CQ8TCG5 803 aa10.4□□□□□ -0.74
PHGDH-201ENST00000369407 ZDHHC16Q969W1 377 aa10.4□□□□□ -0.74
PHGDH-201ENST00000369407 GPR35Q9HC97 309 aa10.4□□□□□ -0.74
PHGDH-201ENST00000369407 ZNF716A6NP11 495 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 RAMP3O60896 148 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 NXPH2O95156 264 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 ATP5G3P48201 142 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 LINC00205P59089 165 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 SRYQ05066 204 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 ZNF816Q0VGE8 651 aaPredicted RBP10.4□□□□□ -0.75
PHGDH-201ENST00000369407 RNPS1Q15287 305 aaKnown RBP10.4□□□□□ -0.75
PHGDH-201ENST00000369407 MMDQ15546 238 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 TRIM61Q5EBN2 209 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 LEMD1Q68G75 181 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 MRPL21Q7Z2W9 205 aaKnown RBP10.4□□□□□ -0.75
PHGDH-201ENST00000369407 VASH2Q86V25 355 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 PINX1Q96BK5 328 aaKnown RBP10.4□□□□□ -0.75
PHGDH-201ENST00000369407 ZPBPQ9BS86 351 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 AGMATQ9BSE5 352 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 MANBALQ9NQG1 85 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 SELENOKQ9Y6D0 94 aa10.4□□□□□ -0.75
PHGDH-201ENST00000369407 ZNF503-AS2A6NEH8 195 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 SIRPB1O00241 398 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 G6PCP35575 357 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 HOXA4Q00056 320 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-201ENST00000369407 C1orf194Q5T5A4 169 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 ZNF808Q8N4W9 903 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-201ENST00000369407 OR10D3Q8NH80 312 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 C19orf25Q9UFG5 118 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-201ENST00000369407 USF3Q68DE3 2245 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 C11orf94C9JXX5 98 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 GGCTO75223 188 aaKnown RBP10.39□□□□□ -0.75
PHGDH-201ENST00000369407 NDUFB4O95168 129 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 FKBP2P26885 142 aaKnown RBP10.39□□□□□ -0.75
PHGDH-201ENST00000369407 THBS3P49746 956 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 ACOT6Q3I5F7 207 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-201ENST00000369407 KMT5CQ86Y97 462 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 ZNF573Q86YE8 665 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 FGFRL1Q8N441 504 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 ST6GALNAC3Q8NDV1 305 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 OR1L1Q8NH94 360 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 PATZ1Q9HBE1 687 aaKnown RBP10.39□□□□□ -0.75
PHGDH-201ENST00000369407 TMEM9BQ9NQ34 198 aa10.39□□□□□ -0.75
PHGDH-201ENST00000369407 TRAV38-1A0A0B4J264 116 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 CCKARP32238 428 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 RAC3P60763 192 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 Q6ZS49 121 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 IGHV5-10-1A0A0J9YXX1 117 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 RBMXL2O75526 392 aaKnown RBP10.38□□□□□ -0.75
PHGDH-201ENST00000369407 CTXN2P0C2S0 81 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 CDKN1AP38936 164 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 SSR4P51571 173 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 ARF1P84077 181 aaKnown RBP10.38□□□□□ -0.75
PHGDH-201ENST00000369407 KRTAP27-1Q3LI81 207 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 SPATA46Q5T0L3 261 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 CISD2Q8N5K1 135 aaKnown RBP10.38□□□□□ -0.75
PHGDH-201ENST00000369407 VN1R17PQ8TDU5 208 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 NEIL1Q96FI4 390 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-201ENST00000369407 CCL25O15444 150 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 ADMP35318 185 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 CENPVQ7Z7K6 275 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-201ENST00000369407 GGNQ86UU5 652 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 SGMS2Q8NHU3 365 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 C1QTNF5Q9BXJ0 243 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 DLL3Q9NYJ7 618 aa10.38□□□□□ -0.75
PHGDH-201ENST00000369407 CTXND1A0A1B0GTU2 59 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 F2Z2F3 143 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 TMEM250H0YL14 139 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms