RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 CCDC144NLQ6NUI1 221 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 OR52M1Q8NGK5 317 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 ZFP30Q9Y2G7 519 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 ZNF273Q14593 569 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 SIGIRRQ6IA17 410 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 PGA4P0DJD7 388 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 PGA5P0DJD9 388 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 FGF11Q92914 225 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 SH3BGRL3Q9H299 93 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 KCNK7Q9Y2U2 307 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 MOB4Q9Y3A3 225 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 HPRT1P00492 218 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 CEACAM21Q3KPI0 293 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 RHOVQ96L33 236 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 AMELYQ99218 206 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 TRPM6Q9BX84 2022 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 IGHV3OR16-8A0A075B7F1 116 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 HSPB9Q9BQS6 159 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 PNRC1Q12796 327 aaPredicted RBP15.67■□□□□ 0.1
SNX27-202ENST00000368841 IBA57Q5T440 356 aaKnown RBP15.67■□□□□ 0.1
SNX27-202ENST00000368841 MRGPRGQ86SM5 289 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 SGMS2Q8NHU3 365 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 B4DEV8 164 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 GCGP01275 180 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 ZNF501Q96CX3 271 aaPredicted RBP15.67■□□□□ 0.1
SNX27-202ENST00000368841 CALYQ9NYX4 217 aa15.67■□□□□ 0.1
SNX27-202ENST00000368841 ELOA3CA0A087WX78 387 aaPredicted RBP15.66■□□□□ 0.1
SNX27-202ENST00000368841 LINC00469Q8N7U9 141 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 TGIF2-C20orf24A0A0A6YYL0 155 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 CTXND1A0A1B0GTU2 59 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 HTN3P15516 51 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 LCN2P80188 198 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 PRR19A6NJB7 356 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 C9JCJ5 164 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 PRSS53Q2L4Q9 553 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 CXorf66Q5JRM2 361 aaPredicted RBP15.66■□□□□ 0.1
SNX27-202ENST00000368841 SLC25A33Q9BSK2 321 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 LOC101059948A0A1B0GTJ6 334 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 EPOPA6NHQ4 379 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 LINC00596Q86U02 117 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 SCN2AQ99250 2005 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 ANOS1P23352 680 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 RND2P52198 227 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 SCAND1P57086 179 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 ATP5G2Q06055 141 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 MEIG1Q5JSS6 88 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 NFAM1Q8NET5 270 aaPredicted RBP15.66■□□□□ 0.1
SNX27-202ENST00000368841 OR13C6PQ8NH95 151 aa15.66■□□□□ 0.1
SNX27-202ENST00000368841 PPIAL4CA0A0B4J2A2 164 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 PPIAL4GP0DN37 164 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 MMP16P51512 607 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 OPN4Q9UHM6 478 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 ARL14EPLP0DKL9 152 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 C10orf35Q96D05 121 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 MOSP00540 346 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 KIAA1644Q3SXP7 199 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 CALHM1Q8IU99 346 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 MBNL2Q5VZF2 373 aaKnown RBP15.65■□□□□ 0.1
SNX27-202ENST00000368841 HOGA1Q86XE5 327 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 HIST1H4GQ99525 98 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 WFDC6Q9BQY6 131 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 TMEM56-RWDD3S4R434 201 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 OTOFQ9HC10 1997 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 FAM214BQ7L5A3 538 aa15.65■□□□□ 0.1
SNX27-202ENST00000368841 ARAP2Q8WZ64 1704 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 IGKV1-8A0A0C4DH67 115 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 GPX1P07203 203 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 PRSS2P07478 247 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 CD99P14209 185 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 MUC1P15941 1255 aaPredicted RBP15.64■□□□□ 0.09
SNX27-202ENST00000368841 IDI2-AS1Q9NZ38 188 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 FOXJ2Q9P0K8 574 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 ZNF256Q9Y2P7 627 aaPredicted RBP15.64■□□□□ 0.09
SNX27-202ENST00000368841 CXCL2P19875 107 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 KLRB1Q12918 225 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 PNKDQ8N490 385 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 MARVELD3Q96A59 401 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 IL19Q9UHD0 177 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 TGFAP01135 160 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 CARFQ8N187 725 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 ABHD12Q8N2K0 398 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 MIOXQ9UGB7 285 aa15.64■□□□□ 0.09
SNX27-202ENST00000368841 GFRA3O60609 400 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 ZG16O60844 167 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 AMY1AP04745 511 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 TMEM177Q53S58 311 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 OR4C13Q8NGP0 309 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 MRPL13Q9BYD1 178 aaKnown RBP15.63■□□□□ 0.09
SNX27-202ENST00000368841 NPVFQ9HCQ7 196 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 DSPPQ9NZW4 1301 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 LGALS3P17931 250 aaKnown RBP15.63■□□□□ 0.09
SNX27-202ENST00000368841 ZNF79Q15937 498 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 LOC105371242A0A075B767 164 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 DLL1O00548 723 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 PLA2G10O15496 165 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 SRSF12Q8WXF0 261 aaKnown RBP15.63■□□□□ 0.09
SNX27-202ENST00000368841 NINQ8N4C6 2090 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 ANKRD31Q8N7Z5 1873 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 A0A0U1RQV5 110 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 MOSPD3O75425 235 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms