RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 BDP1A6H8Y1 2624 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 WNT9BO14905 357 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 ORM1P02763 201 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 PDZD11Q5EBL8 140 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 ZNF66Q6ZN08 573 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 OR5P3Q8WZ94 311 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 GPR132Q9UNW8 380 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 PIKFYVEQ9Y2I7 2098 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 FAM181BA6NEQ2 426 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 TMEM14DPA8MWL7 114 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 IGHV3-23P01764 117 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 DYNLT3P51808 116 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 ZNF429Q86V71 674 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 OR4X1Q8NH49 305 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 RNASE6Q93091 150 aaKnown RBP9.9□□□□□ -0.82
SYNE1-204ENST00000367248 SSBP3Q9BWW4 388 aaPredicted RBP9.9□□□□□ -0.82
SYNE1-204ENST00000367248 PARD6AQ9NPB6 346 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 TMSB15BA0A087X1C1 80 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 hCG_38984A0A1B0GV85 526 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 LIPFP07098 398 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 EWSR1Q01844 656 aaKnown RBP eCLIP9.9□□□□□ -0.82
SYNE1-204ENST00000367248 OR51B2Q9Y5P1 312 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 S4R3C0 116 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.9□□□□□ -0.82
SYNE1-204ENST00000367248 C7orf66A4D0T2 115 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 GPHA2Q96T91 129 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 MMP24Q9Y5R2 645 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 PTGDSP41222 190 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 LHX2P50458 406 aa9.9□□□□□ -0.82
SYNE1-204ENST00000367248 MGPP08493 103 aa9.9□□□□□ -0.83
SYNE1-204ENST00000367248 CELA3BP08861 270 aa9.9□□□□□ -0.83
SYNE1-204ENST00000367248 MUC1P15941 1255 aaPredicted RBP9.9□□□□□ -0.83
SYNE1-204ENST00000367248 OR9G1Q8NH87 305 aa9.9□□□□□ -0.83
SYNE1-204ENST00000367248 RTN4RQ9BZR6 473 aa9.9□□□□□ -0.83
SYNE1-204ENST00000367248 IGHV3-48P01763 117 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 RCC1P18754 421 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-204ENST00000367248 NSUN5P1Q3KNT7 163 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 SOSTQ9BQB4 213 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 REPIN1Q9BWE0 567 aaKnown RBP9.89□□□□□ -0.83
SYNE1-204ENST00000367248 TMEM167BQ9NRX6 74 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 IDI2-AS1Q9NZ38 188 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 NPIPB7O75200 414 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 FAM78BQ5VT40 261 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 MMD2Q8IY49 270 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 ZNF837Q96EG3 531 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-204ENST00000367248 WDR61Q9GZS3 305 aaKnown RBP9.89□□□□□ -0.83
SYNE1-204ENST00000367248 TMEM106BQ9NUM4 274 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 ZNF729A6NN14 1252 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-204ENST00000367248 G3V3Q6 166 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 SFTA3P0C7M3 94 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 UQCC3Q6UW78 93 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 GLIPR1P48060 266 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 NPAS1Q99742 590 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 RBBP6Q7Z6E9 1792 aaKnown RBP9.89□□□□□ -0.83
SYNE1-204ENST00000367248 IGHV3-49A0A0A0MS15 119 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 MEGF10Q96KG7 1140 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 JPT1Q9UK76 154 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 MBPP02686 304 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-204ENST00000367248 B2MP61769 119 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 TM4SF20Q53R12 229 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 MRPL13Q9BYD1 178 aaKnown RBP9.89□□□□□ -0.83
SYNE1-204ENST00000367248 TMEM222Q9H0R3 208 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 ZDHHC11Q9H8X9 412 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 SEMA5BQ9P283 1151 aa9.89□□□□□ -0.83
SYNE1-204ENST00000367248 IGHV2OR16-5A0A0B4J2B6 119 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 PLAUP00749 431 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 AANATQ16613 207 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 MYPOPQ86VE0 399 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-204ENST00000367248 AQP3Q92482 292 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 METRNQ9UJH8 293 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 H0Y980 276 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 ZNF737O75373 536 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 ID1P41134 155 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 IFITM3Q01628 133 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 RPEL1Q2QD12 228 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 TUSC1Q2TAM9 212 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 CXorf66Q5JRM2 361 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-204ENST00000367248 PDPNQ86YL7 162 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 GAR1Q9NY12 217 aaKnown RBP9.88□□□□□ -0.83
SYNE1-204ENST00000367248 WASHC3Q9Y3C0 194 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 TSTD3H0UI37 97 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 IGHV1-2P23083 117 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 NPBWR2P48146 333 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 MMP26Q9NRE1 261 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 ZFHX2Q9C0A1 2572 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-204ENST00000367248 TMEM30BQ3MIR4 351 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 TMEM255AQ5JRV8 349 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 EBLN2Q6P2I7 272 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 CRXO43186 299 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-204ENST00000367248 PCSK4Q6UW60 755 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 C16orf82Q7Z2V1 217 aa9.88□□□□□ -0.83
SYNE1-204ENST00000367248 OR4P4Q8NGL7 312 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 HTN3P15516 51 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 SLC24A4Q8NFF2 622 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 C16orf92Q96LL3 132 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 PINLYPA6NC86 204 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 TMEM241Q24JQ0 296 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 FAM162BQ5T6X4 162 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 MAPK1IP1LQ8NDC0 245 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 GNG4P50150 75 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms