RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 TRAV30A0A087WSZ9 112 aa11.54□□□□□ -0.56
LDB3-202ENST00000361373 HSPE1P61604 102 aaKnown RBP11.54□□□□□ -0.56
LDB3-202ENST00000361373 H1FOOQ8IZA3 346 aaPredicted RBP11.54□□□□□ -0.56
LDB3-202ENST00000361373 C2CD4CQ8TF44 421 aa11.54□□□□□ -0.56
LDB3-202ENST00000361373 FAM103A1Q9BTL3 118 aaKnown RBP11.54□□□□□ -0.56
LDB3-202ENST00000361373 NIT2Q9NQR4 276 aa11.54□□□□□ -0.56
LDB3-202ENST00000361373 P01737 135 aa11.54□□□□□ -0.56
LDB3-202ENST00000361373 FAM87AP0C7U9 286 aa11.54□□□□□ -0.56
LDB3-202ENST00000361373 SUMO1P63165 101 aaKnown RBP11.54□□□□□ -0.56
LDB3-202ENST00000361373 RIGQ13278 110 aa11.54□□□□□ -0.56
LDB3-202ENST00000361373 VWA1Q6PCB0 445 aa11.54□□□□□ -0.56
LDB3-202ENST00000361373 NRIP2Q9BQI9 281 aa11.54□□□□□ -0.56
LDB3-202ENST00000361373 TRAF4Q9BUZ4 470 aaPredicted RBP11.54□□□□□ -0.56
LDB3-202ENST00000361373 C1QTNF5Q9BXJ0 243 aa11.54□□□□□ -0.56
LDB3-202ENST00000361373 CEACAM18A8MTB9 384 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 FCN1O00602 326 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 PDZD11Q5EBL8 140 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 PRSS3P2Q8NHM4 247 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 FAM210BQ96KR6 192 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 FAM74A7A6NL05 159 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 TM4SF5O14894 197 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 LMX1BO60663 402 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 ATP6V0CP27449 155 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 LOXL3P58215 753 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 TMEM252Q8N6L7 170 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 LRRC75AQ8NAA5 344 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 C5orf17Q8NAS9 161 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 OR4D10Q8NGI6 311 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 P2RX4Q99571 388 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 NAGKQ9UJ70 344 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 COL8A1P27658 744 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 C16orf82Q7Z2V1 217 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 FAM222BQ8WU58 562 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 LSM10Q969L4 123 aaKnown RBP11.53□□□□□ -0.56
LDB3-202ENST00000361373 CCL19Q99731 98 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 RIF1Q5UIP0 2472 aaKnown RBP11.53□□□□□ -0.56
LDB3-202ENST00000361373 HELTA6NFD8 242 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 RAMP1O60894 148 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 FAM157CP0CG43 387 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 FGFRL1Q8N441 504 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 OR2T10Q8NGZ9 312 aa11.53□□□□□ -0.56
LDB3-202ENST00000361373 RNASE6Q93091 150 aaKnown RBP11.53□□□□□ -0.56
LDB3-202ENST00000361373 OR2A4O95047 310 aa11.52□□□□□ -0.56
LDB3-202ENST00000361373 FAM27E3Q08E93 113 aa11.52□□□□□ -0.56
LDB3-202ENST00000361373 OR2A7Q96R45 310 aa11.52□□□□□ -0.56
LDB3-202ENST00000361373 TMEM106BQ9NUM4 274 aa11.52□□□□□ -0.56
LDB3-202ENST00000361373 SLC2A8Q9NY64 477 aa11.52□□□□□ -0.56
LDB3-202ENST00000361373 RABAC1Q9UI14 185 aa11.52□□□□□ -0.56
LDB3-202ENST00000361373 GAMTQ14353 236 aa11.52□□□□□ -0.56
LDB3-202ENST00000361373 RBPMS2Q6ZRY4 209 aaKnown RBP11.52□□□□□ -0.56
LDB3-202ENST00000361373 DOCK6Q96HP0 2047 aa11.52□□□□□ -0.56
LDB3-202ENST00000361373 TMEM218A2RU14 115 aa11.52□□□□□ -0.57
LDB3-202ENST00000361373 CDRT15L2A8MXV6 281 aa11.52□□□□□ -0.57
LDB3-202ENST00000361373 KLF7O75840 302 aaPredicted RBP11.52□□□□□ -0.57
LDB3-202ENST00000361373 MMP7P09237 267 aaPredicted RBP11.52□□□□□ -0.57
LDB3-202ENST00000361373 AMTP48728 403 aa11.52□□□□□ -0.57
LDB3-202ENST00000361373 LHX2P50458 406 aa11.52□□□□□ -0.57
LDB3-202ENST00000361373 HOXA4Q00056 320 aaPredicted RBP11.52□□□□□ -0.57
LDB3-202ENST00000361373 OVCH2Q7RTZ1 564 aa11.52□□□□□ -0.57
LDB3-202ENST00000361373 ARL2-SNX15V9GYD0 113 aa11.52□□□□□ -0.57
LDB3-202ENST00000361373 SS18L1O75177 396 aaPredicted RBP11.52□□□□□ -0.57
LDB3-202ENST00000361373 DEDDO75618 318 aa11.52□□□□□ -0.57
LDB3-202ENST00000361373 OR2J3O76001 311 aa11.52□□□□□ -0.57
LDB3-202ENST00000361373 CLDN18P56856 261 aa11.52□□□□□ -0.57
LDB3-202ENST00000361373 LINC01560Q8TB33 94 aa11.52□□□□□ -0.57
LDB3-202ENST00000361373 CLEC5AQ9NY25 188 aa11.52□□□□□ -0.57
LDB3-202ENST00000361373 CD74P04233 296 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 VSIG10L2P0DP72 767 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 TMEM37Q8WXS4 190 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 PAXXQ9BUH6 204 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 REPIN1Q9BWE0 567 aaKnown RBP11.51□□□□□ -0.57
LDB3-202ENST00000361373 SIRT7Q9NRC8 400 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 MFNGO00587 321 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 RCC1P18754 421 aaPredicted RBP11.51□□□□□ -0.57
LDB3-202ENST00000361373 FCER1GP30273 86 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 RAB9AP51151 201 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 ARF6P62330 175 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 LRRC75BQ2VPJ9 315 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 IGHV2OR16-5A0A0B4J2B6 119 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 IZUMO4Q1ZYL8 232 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 TMEM255AQ5JRV8 349 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 TUBD1Q9UJT1 453 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 C17orf51A8MQB3 221 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 PAGE4O60829 102 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 PF4V1P10720 104 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 CRYBA2P53672 197 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 MFAP4P55083 255 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 UNQ5815/PRO19632Q6UWF5 114 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 POC1AQ8NBT0 407 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 SNRNP40Q96DI7 357 aaKnown RBP11.51□□□□□ -0.57
LDB3-202ENST00000361373 SPTBN2O15020 2390 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 BMPR1BO00238 502 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 MEF2CQ06413 473 aaPredicted RBP11.51□□□□□ -0.57
LDB3-202ENST00000361373 CLEC9AQ6UXN8 241 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 PQLC2Q6ZP29 291 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 METTL26Q96S19 204 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 TM2D1Q9BX74 207 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 TMEM140Q9NV12 185 aa11.51□□□□□ -0.57
LDB3-202ENST00000361373 P2RY4P51582 365 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 KRTDAPP60985 99 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms