RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 COL5A1-AS1Q5SY13 56 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 ARHGAP32A7KAX9 2087 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 HELZP42694 1942 aaKnown RBP8.43□□□□□ -1.06
CUX1-203ENST00000360264 A0A1W2PRD5 423 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 A0A1W2PRF3 423 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 A0A1W2PRM7 423 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 ATP5J2P56134 94 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 A0A0B4J293 547 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 H7C1H1 209 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 DRD3P35462 400 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 OR8D4Q8NGM9 314 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 TREM2Q9NZC2 230 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 A0A0G2JLM5 398 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 CDX1P47902 265 aaPredicted RBP8.43□□□□□ -1.06
CUX1-203ENST00000360264 WDR25Q64LD2 544 aaPredicted RBP8.43□□□□□ -1.06
CUX1-203ENST00000360264 SIPA1L3O60292 1781 aaPredicted RBP8.43□□□□□ -1.06
CUX1-203ENST00000360264 C17orf51A8MQB3 221 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 VN1R4Q7Z5H5 301 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 SNURFLB1AK76 121 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 FGF12P61328 243 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 FAM27BQ5VT28 67 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 PQLC2Q6ZP29 291 aa8.43□□□□□ -1.06
CUX1-203ENST00000360264 SETD2Q9BYW2 2564 aaPredicted RBP8.43□□□□□ -1.06
CUX1-203ENST00000360264 MARF1Q9Y4F3 1742 aaKnown RBP8.43□□□□□ -1.06
CUX1-203ENST00000360264 MPZL1O95297 269 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 GUCA2BQ16661 112 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 ADAT3Q96EY9 351 aaPredicted RBP8.42□□□□□ -1.06
CUX1-203ENST00000360264 DCTN5Q9BTE1 182 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 TTTY12Q9BZ98 90 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 TMEM140Q9NV12 185 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 RALYQ9UKM9 306 aaKnown RBP8.42□□□□□ -1.06
CUX1-203ENST00000360264 IL9P15248 144 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 OR10J1P30954 320 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM214BQ7L5A3 538 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 MTURNQ8N3F0 131 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 C2orf88Q9BSF0 95 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 RNF115Q9Y4L5 304 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 GHRHP01286 108 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FHL5Q5TD97 284 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FSCN3Q9NQT6 498 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 AMY1AP04745 511 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 PKIAP61925 76 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 RPS4XP62701 263 aaKnown RBP8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A10PA6NDY2 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A18PA6NE21 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A16PA6NEW6 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A20PA6NIJ5 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A8PA6NJQ4 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A7PA6NKC0 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A22PA8MWA6 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A12PA8MX19 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A5PA8MXJ8 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A23PA8MXZ1 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A15PP0C7V4 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A13PP0C7W8 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A14PP0C7W9 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FAM90A24PP0C7X0 464 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 CTSSP25774 331 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 PMS2CLQ68D20 193 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 GPA33Q99795 319 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 ZNF324O75467 553 aaPredicted RBP8.42□□□□□ -1.06
CUX1-203ENST00000360264 SNRPEP62304 92 aaKnown RBP8.42□□□□□ -1.06
CUX1-203ENST00000360264 RNFT1Q5M7Z0 435 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 OR4C13Q8NGP0 309 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 PRR33A8MZF0 331 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 PATE4P0C8F1 98 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FGF5P12034 268 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 FSTP19883 344 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 RBM11P57052 281 aaKnown RBP8.42□□□□□ -1.06
CUX1-203ENST00000360264 MESTQ5EB52 335 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 ZNF841Q6ZN19 808 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 PGLYRP3Q96LB9 341 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 MAP1LC3AQ9H492 121 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 A0A1W2PQM1 296 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 THSD4Q6ZMP0 1018 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 SAXO1Q8IYX7 474 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 TMEM70Q9BUB7 260 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 KBTBD11O94819 623 aa8.42□□□□□ -1.06
CUX1-203ENST00000360264 J3QW42 95 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 CBLN3Q6UW01 205 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 MSL2Q9HCI7 577 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 CA2P00918 260 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 RPL8P62917 257 aaKnown RBP8.41□□□□□ -1.06
CUX1-203ENST00000360264 PMCHL1Q16048 86 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 C16orf47Q6ZP98 133 aaPredicted RBP8.41□□□□□ -1.06
CUX1-203ENST00000360264 PRSS41Q7RTY9 318 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 ORAI1Q96D31 301 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 CCL19Q99731 98 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 PSME4Q14997 1843 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 COX5BP10606 129 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 WFDC3Q8IUB2 231 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 GEMIN7Q9H840 131 aaKnown RBP8.41□□□□□ -1.06
CUX1-203ENST00000360264 IGHV1-45A0A0A0MS14 117 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 AESQ08117 197 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 ZNF721Q8TF20 911 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 ALG14Q96F25 216 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 CXorf65A6NEN9 183 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 FOXH1O75593 365 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 IFI6P09912 130 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 SEC11BP0C7V7 166 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms