RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 EGR1P18146 543 aa10.64□□□□□ -0.71
GGPS1-202ENST00000358966 CD40P25942 277 aa10.64□□□□□ -0.71
GGPS1-202ENST00000358966 BMI1P35226 326 aa10.64□□□□□ -0.71
GGPS1-202ENST00000358966 RPL29P47914 159 aaKnown RBP10.64□□□□□ -0.71
GGPS1-202ENST00000358966 MPV17LQ2QL34 196 aa10.64□□□□□ -0.71
GGPS1-202ENST00000358966 PHB2Q99623 299 aa10.64□□□□□ -0.71
GGPS1-202ENST00000358966 SLC25A31Q9H0C2 315 aa10.64□□□□□ -0.71
GGPS1-202ENST00000358966 USP24Q9UPU5 2620 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 IGHV3OR15-7A0A075B7D8 119 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 SLC33A1O00400 549 aaPredicted RBP10.63□□□□□ -0.71
GGPS1-202ENST00000358966 DVL1O14640 695 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 GGCTO75223 188 aaKnown RBP10.63□□□□□ -0.71
GGPS1-202ENST00000358966 IRF2P14316 349 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 KITLGP21583 273 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 ID4P47928 161 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 PIGPP57054 158 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 LEMD1Q68G75 181 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 BTNL3Q6UXE8 466 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 FAM210BQ96KR6 192 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 Q9N2K0 584 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 C1orf123Q9NWV4 160 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 USF3Q68DE3 2245 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 CRYBG3Q68DQ2 2970 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 VPS13CQ709C8 3753 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 IGKV1D-13A0A0B4J2D9 117 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 C5orf51A6NDU8 294 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 C16orf97H3BN30 126 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 DUS4LO95620 317 aaKnown RBP10.63□□□□□ -0.71
GGPS1-202ENST00000358966 IGKV1-13P0DP09 117 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 ERVFC1-1P60608 527 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 EIF5AP63241 154 aaKnown RBP10.63□□□□□ -0.71
GGPS1-202ENST00000358966 RHEBQ15382 184 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 MBNL2Q5VZF2 373 aaKnown RBP10.63□□□□□ -0.71
GGPS1-202ENST00000358966 TMEM211Q6ICI0 200 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 MRGPRGQ86SM5 289 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 ZCCHC14Q8WYQ9 949 aaKnown RBP10.63□□□□□ -0.71
GGPS1-202ENST00000358966 SMIM8Q96KF7 97 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 PARP12Q9H0J9 701 aaKnown RBP10.63□□□□□ -0.71
GGPS1-202ENST00000358966 POLDIP2Q9Y2S7 368 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 TMED3Q9Y3Q3 217 aa10.63□□□□□ -0.71
GGPS1-202ENST00000358966 EPG5Q9HCE0 2579 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A27PA6NNH2 459 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 CEACAM18A8MTB9 384 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 TRGC2P03986 189 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 HKR1P10072 659 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 BSPH1Q075Z2 132 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 SSX7Q7RTT5 188 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 NEUROG1Q92886 237 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 OR2V2Q96R30 315 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 ACTR3CQ9C0K3 210 aaPredicted RBP10.62□□□□□ -0.71
GGPS1-202ENST00000358966 OR1A1Q9P1Q5 309 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 NKX2-6A6NCS4 301 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 DPRXA6NFQ7 191 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 TNFSF12O43508 249 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 ZNF728P0DKX0 622 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 EPHA1P21709 976 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 UCNP55089 124 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 FAM185AQ8N0U4 392 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 LRRC29Q8WV35 223 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 CXXC4Q9H2H0 198 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 C14orf166Q9Y224 244 aaKnown RBP10.62□□□□□ -0.71
GGPS1-202ENST00000358966 RNF24Q9Y225 148 aa10.62□□□□□ -0.71
GGPS1-202ENST00000358966 TEX13DA0A0J9YY54 714 aaPredicted RBP10.61□□□□□ -0.71
GGPS1-202ENST00000358966 A0A1W2PN81 502 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 SFT2D2O95562 160 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 HAND1O96004 215 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 PPYP01298 95 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 CXCL1P09341 107 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 OR4A8P0C604 315 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 TRGC1P0CF51 173 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 CHRNA7P36544 502 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 KLF3P57682 345 aaPredicted RBP10.61□□□□□ -0.71
GGPS1-202ENST00000358966 MOGAT3Q86VF5 341 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 CD300LFQ8TDQ1 290 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 RND1Q92730 232 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 SAT2Q96F10 170 aaPredicted RBP10.61□□□□□ -0.71
GGPS1-202ENST00000358966 OR10C1Q96KK4 312 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 WFIKKN1Q96NZ8 548 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 TAAR3PQ9P1P4 343 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 CSMD1Q96PZ7 3565 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A10PA6NDY2 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A18PA6NE21 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A16PA6NEW6 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A20PA6NIJ5 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A8PA6NJQ4 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A7PA6NKC0 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A22PA8MWA6 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A12PA8MX19 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A5PA8MXJ8 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A23PA8MXZ1 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 OR5AC1P0C628 307 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A15PP0C7V4 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A13PP0C7W8 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A14PP0C7W9 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 FAM90A24PP0C7X0 464 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 AESQ08117 197 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 ZNF343Q6P1L6 599 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 TEX38Q6PEX7 206 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 DCTN5Q9BTE1 182 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 SLC2A9Q9NRM0 540 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms