RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 MARVELD3Q96A59 401 aa12.52□□□□□ -0.41
SLC6A20-202ENST00000358525 PACRGQ96M98 296 aaPredicted RBP12.52□□□□□ -0.41
SLC6A20-202ENST00000358525 OR4C12Q96R67 309 aa12.52□□□□□ -0.41
SLC6A20-202ENST00000358525 WDR61Q9GZS3 305 aaKnown RBP12.52□□□□□ -0.41
SLC6A20-202ENST00000358525 ZDBF2Q9HCK1 2354 aa12.52□□□□□ -0.41
SLC6A20-202ENST00000358525 DANCRP0C864 163 aa12.52□□□□□ -0.41
SLC6A20-202ENST00000358525 DHRS7BQ6IAN0 325 aaPredicted RBP12.52□□□□□ -0.41
SLC6A20-202ENST00000358525 TCF20Q9UGU0 1960 aaKnown RBP12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 K7N7A8 449 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 CLPSP04118 112 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 GLIPR1P48060 266 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 ASCL5Q7RTU5 278 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 OR1L8Q8NGR8 309 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 TAF15Q92804 592 aaKnown RBP eCLIP12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 FAM117AQ9C073 453 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 ZNF319Q9P2F9 582 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 INSIG2Q9Y5U4 225 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 IGHV3-21A0A0B4J1V1 117 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 RNF222A6NCQ9 220 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 H0YL77 283 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 LYZL4Q96KX0 146 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 PXMP4Q9Y6I8 212 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 IGKV1-9A0A0C4DH69 117 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 ODAMA1E959 279 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 HOXA6P31267 233 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 C10orf113Q5VZT2 155 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 OR10S1Q8NGN2 331 aa12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 MARS2Q96GW9 593 aaKnown RBP12.51□□□□□ -0.41
SLC6A20-202ENST00000358525 HELTA6NFD8 242 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 CDX4O14627 284 aaPredicted RBP12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 RHBDL1O75783 438 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 S1PR2O95136 353 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 SMIM6P0DI80 62 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 CRISP2P16562 243 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 GAMTQ14353 236 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 WDR73Q6P4I2 378 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 LRRC3CA6NJW4 275 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 HSPB1P04792 205 aaKnown RBP12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 DHRS11Q6UWP2 260 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 ZG16O60844 167 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 WNT5AP41221 380 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 SPCS3P61009 180 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 OR1L6Q8NGR2 347 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 LEAP2Q969E1 77 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 ASCL3Q9NQ33 180 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 WNT9BO14905 357 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 EFNA2O43921 213 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 RND3P61587 244 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 RANP62826 216 aaKnown RBP12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 TNFRSF9Q07011 255 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 FA2HQ7L5A8 372 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 FDCSPQ8NFU4 85 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 ZNF714Q96N38 554 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 NPVFQ9HCQ7 196 aa12.5□□□□□ -0.41
SLC6A20-202ENST00000358525 LOC102723971A0A1B0GUV8 181 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 HOXB1P14653 301 aaPredicted RBP12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 PAQR4Q8N4S7 273 aaPredicted RBP12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 DRAM1Q8N682 238 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 KLHDC1Q8N7A1 406 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 SDK2Q58EX2 2172 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 LOC102723996A0A087X1L8 192 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 CYB5R3P00387 301 aaPredicted RBP12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 FAM216AQ8WUB2 273 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 RHOVQ96L33 236 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 C1QTNF5Q9BXJ0 243 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 IL36RNQ9UBH0 155 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 IGLV3-32A0A0A0MS00 114 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 NAT2P11245 290 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 RTP5Q14D33 572 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 MRPL54Q6P161 138 aaKnown RBP12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 GCSAMQ8N6F7 178 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 CALYQ9NYX4 217 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 USF1P22415 310 aaPredicted RBP12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 SSX7Q7RTT5 188 aa12.49□□□□□ -0.41
SLC6A20-202ENST00000358525 IGSF23A1L1A6 192 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 SSTR5P35346 364 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 LY6G6FQ5SQ64 297 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 THYN1Q9P016 225 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 MARCH11A6NNE9 402 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 PTBP3O95758 552 aaKnown RBP12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 SNRPCP09234 159 aaKnown RBP12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 MEF2BQ02080 365 aaPredicted RBP12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 FGF11Q92914 225 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 ZNF98A6NK75 572 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 PGA5P0DJD9 388 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 MIOXQ9UGB7 285 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 GBF1Q92538 1859 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 HOXD4P09016 255 aaPredicted RBP12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 ZNF735P0CB33 412 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 TCTEX1D1Q8N7M0 179 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 AMTP48728 403 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 KRTCAP3Q53RY4 240 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 LSM10Q969L4 123 aaKnown RBP12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 RNF24Q9Y225 148 aa12.48□□□□□ -0.41
SLC6A20-202ENST00000358525 A0A0A6YYD4 124 aa12.47□□□□□ -0.41
SLC6A20-202ENST00000358525 NDUFB4O95168 129 aa12.47□□□□□ -0.41
SLC6A20-202ENST00000358525 MMP7P09237 267 aaPredicted RBP12.47□□□□□ -0.41
SLC6A20-202ENST00000358525 PAX6P26367 422 aa12.47□□□□□ -0.41
SLC6A20-202ENST00000358525 IER3P46695 156 aa12.47□□□□□ -0.41
SLC6A20-202ENST00000358525 Q6ZT83 130 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms