RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 CRYBA2P53672 197 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 OR9G1Q8NH87 305 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 KCNAB3O43448 404 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 CRHP06850 196 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 RD3LP0DJH9 198 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM27BQ5VT28 67 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 LDLRAD3Q86YD5 345 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 AMER3Q8N944 861 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 OR8G5Q8NG78 346 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 IGKV3D-11A0A0A0MRZ8 115 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 IGKV3-11P04433 115 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 IER3P46695 156 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 DNLZQ5SXM8 178 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 LRRC75AQ8NAA5 344 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 OR11H4Q8NGC9 324 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 PGLYRP3Q96LB9 341 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 TP53RKQ96S44 253 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 NPDC1Q9NQX5 325 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-202ENST00000356435 SBF2Q86WG5 1849 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 SCN3AQ9NY46 2000 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 NKX2-6A6NCS4 301 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 IFITM10A6NMD0 228 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 TRGC1P0CF51 173 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 BTF3P20290 206 aaKnown RBP4.79□□□□□ -1.64
PTPRD-202ENST00000356435 HINT1P49773 126 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-202ENST00000356435 CFAP161Q6P656 301 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 MRGPRGQ86SM5 289 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 WDFY1Q8IWB7 410 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 OR10D4PQ8NGN7 298 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 SIRT7Q9NRC8 400 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 IL19Q9UHD0 177 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 IL17BQ9UHF5 180 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A10PA6NDY2 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A18PA6NE21 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A16PA6NEW6 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A20PA6NIJ5 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A8PA6NJQ4 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A7PA6NKC0 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A22PA8MWA6 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A12PA8MX19 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A5PA8MXJ8 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A23PA8MXZ1 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 SYNGR3O43761 229 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 PAGE4O60829 102 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A15PP0C7V4 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A13PP0C7W8 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A14PP0C7W9 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM90A24PP0C7X0 464 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 PSG6Q00889 435 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 EWSR1Q01844 656 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTPRD-202ENST00000356435 INPP5JQ15735 1006 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-202ENST00000356435 GVQW1Q8N7I0 195 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM168AQ92567 244 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 DYRK2Q92630 601 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 CARHSP1Q9Y2V2 147 aaKnown RBP4.79□□□□□ -1.64
PTPRD-202ENST00000356435 H0Y980 276 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 NUDT3O95989 172 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 CYB5R3P00387 301 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FCARP24071 287 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 RPL29P47914 159 aaKnown RBP4.79□□□□□ -1.64
PTPRD-202ENST00000356435 ST3GAL2Q16842 350 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 SLC16A13Q7RTY0 426 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 OR5AU1Q8NGC0 362 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 OR10AC1Q8NH08 325 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 FAM216AQ8WUB2 273 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM45BQ96B21 275 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF501Q96CX3 271 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-202ENST00000356435 CALYQ9NYX4 217 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 PILRBQ9UKJ0 227 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 SPTA1P02549 2419 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 LTBP4Q8N2S1 1624 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 MPV17P39210 176 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 CSRP2Q16527 193 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM186Q96B77 213 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 KIR2DL4Q99706 377 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 CFHR5Q9BXR6 569 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 GEMIN7Q9H840 131 aaKnown RBP4.79□□□□□ -1.64
PTPRD-202ENST00000356435 RALYQ9UKM9 306 aaKnown RBP4.79□□□□□ -1.64
PTPRD-202ENST00000356435 A0A0U1RQV5 110 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 FAM74A7A6NL05 159 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 SNURFLB1AK76 121 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 CEACAM4O75871 244 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 KBTBD11O94819 623 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 OR2H2O95918 312 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 NPPCP23582 126 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 OR10J1P30954 320 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 JOSD1Q15040 202 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-202ENST00000356435 FAM74A4Q5TZK3 123 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 DMKNQ6E0U4 476 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-202ENST00000356435 UBE2DNLQ8IWF7 75 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 REG4Q9BYZ8 158 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 IGKV3OR2-268A0A0C4DH90 116 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 A0A0G2JLM5 398 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 MED19A0JLT2 244 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF729A6NN14 1252 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-202ENST00000356435 HYAL3O43820 417 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-202ENST00000356435 TTRP02766 147 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 IGHV3-72A0A0B4J1Y9 119 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 A8MWL6 223 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 H7C2G1 150 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms