RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 CD34P28906 385 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 OR3A1P47881 315 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 EIF2B2P49770 351 aaKnown RBP5.71□□□□□ -1.5
VPS13A-201ENST00000355766 HTD2P86397 168 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 CYCSP99999 105 aaKnown RBP5.71□□□□□ -1.5
VPS13A-201ENST00000355766 CBX3Q13185 183 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 FCN2Q15485 313 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 Q3ZCU0 254 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 ESCO2Q56NI9 601 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 PRAMEF6Q5VXH4 476 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 STUMQ69YW2 141 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 TMED4Q7Z7H5 227 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 NOXA1Q86UR1 476 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 LRP11Q86VZ4 500 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 SGPP2Q8IWX5 399 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 CMTM1Q8IZ96 169 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 H1FOOQ8IZA3 346 aaPredicted RBP5.71□□□□□ -1.5
VPS13A-201ENST00000355766 MUC20Q8N307 709 aaPredicted RBP5.71□□□□□ -1.5
VPS13A-201ENST00000355766 C12orf45Q8N5I9 185 aaPredicted RBP5.71□□□□□ -1.5
VPS13A-201ENST00000355766 TCTEX1D1Q8N7M0 179 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 ZBTB34Q8NCN2 500 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 OR2AK2Q8NG84 335 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 OR11H7Q8NGC8 314 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 CLDND2Q8NHS1 167 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 ANGPTL6Q8NI99 470 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 ITLN1Q8WWA0 313 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 AKR1E2Q96JD6 320 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 ZNF2Q9BSG1 426 aaPredicted RBP5.71□□□□□ -1.5
VPS13A-201ENST00000355766 HDHD3Q9BSH5 251 aaPredicted RBP5.71□□□□□ -1.5
VPS13A-201ENST00000355766 LINC00574Q9H8X3 128 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 DYNLRB1Q9NP97 96 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 FAM212BQ9NTI7 297 aaPredicted RBP5.71□□□□□ -1.5
VPS13A-201ENST00000355766 OR6C3Q9NZP0 311 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 IL36RNQ9UBH0 155 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 DNAJB11Q9UBS4 358 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 ZNF230Q9UIE0 474 aaPredicted RBP5.71□□□□□ -1.5
VPS13A-201ENST00000355766 PPP1R3CQ9UQK1 317 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 IGKV1D-8A0A087WSZ0 117 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 TRAV38-1A0A0B4J264 116 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 OR5H14A6NHG9 310 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 CRYM-AS1A6NIL9 109 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 NKX6-3A6NJ46 265 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 BOLA2-SMG1P6H3BVE0 249 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 LGALS8O00214 317 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 SIGLEC5O15389 551 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 SPRY3O43610 288 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 PET100P0DJ07 73 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 PSG2P11465 335 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 RPS2P15880 293 aaKnown RBP5.7□□□□□ -1.5
VPS13A-201ENST00000355766 FCGR2CP31995 323 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 PRDX2P32119 198 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 NPY4RP50391 375 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 P2RX3P56373 397 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 GMFBP60983 142 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 PPP1R1AQ13522 171 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 ABCA11PQ4W5N1 156 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 RTN4RL2Q86UN3 420 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 MOGAT3Q86VF5 341 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 OR10A7Q8NGE5 316 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 OR10J5Q8NHC4 309 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 MARCH1Q8TCQ1 289 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 DYRK2Q92630 601 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 RDH5Q92781 318 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 IL22RA2Q969J5 263 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 GALMQ96C23 342 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 ZNF488Q96MN9 340 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 SEC22CQ9BRL7 303 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 RTBDNQ9BSG5 229 aaPredicted RBP5.7□□□□□ -1.5
VPS13A-201ENST00000355766 FXYD6Q9H0Q3 95 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 RANGRFQ9HD47 186 aaPredicted RBP5.7□□□□□ -1.5
VPS13A-201ENST00000355766 SLC2A9Q9NRM0 540 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 ZFP57Q9NU63 452 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 ZNF581Q9P0T4 197 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 MGAT4CQ9UBM8 478 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 KAAG1Q9UBP8 84 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 DKK2Q9UBU2 259 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 JPT1Q9UK76 154 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 TRAPPC2LQ9UL33 140 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 FZR1Q9UM11 496 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 KCNIP3Q9Y2W7 256 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 OR2W1Q9Y3N9 320 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 PPIAL4AQ9Y536 164 aa5.7□□□□□ -1.5
VPS13A-201ENST00000355766 ARFGEF3Q5TH69 2177 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 IGKV1D-17A0A075B6S4 117 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 ODAMA1E959 279 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 FAM172BPA6NC97 362 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 RFPL4AA6NLU0 287 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 HMSDA8MTL9 139 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 RFPL4AL1F8VTS6 287 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 SIRPB1O00241 398 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 GPR31O00270 319 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 SPINT2O43291 252 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 PGAM2P15259 253 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 CXCL3P19876 107 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 DUSP1P28562 367 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 RBMXP38159 391 aaKnown RBP5.69□□□□□ -1.5
VPS13A-201ENST00000355766 GPR6P46095 362 aaPredicted RBP5.69□□□□□ -1.5
VPS13A-201ENST00000355766 NHLH2Q02577 135 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 MEF2CQ06413 473 aaPredicted RBP5.69□□□□□ -1.5
VPS13A-201ENST00000355766 HERPUD1Q15011 391 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms