RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 RAB24Q969Q5 203 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 RPEQ96AT9 228 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 TMEM45BQ96B21 275 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 ANAPC16Q96DE5 110 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 PITPNC1Q9UKF7 332 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 PRNDQ9UKY0 176 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 CRISP2P16562 243 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 RNF144BQ7Z419 303 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 ZIC4Q8N9L1 334 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 FAM90A26D6RGX4 464 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 GATCO43716 136 aaKnown RBP6.14□□□□□ -1.43
VCAN-202ENST00000342785 FAM157CP0CG43 387 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 SCGB2A2Q13296 93 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 TEPPQ6URK8 271 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 BIVMQ86UB2 503 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 SGMS2Q8NHU3 365 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 C1QTNF5Q9BXJ0 243 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 GPR61Q9BZJ8 451 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 PLSCR2Q9NRY7 297 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 FOXJ2Q9P0K8 574 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 PTPRDP23468 1912 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 THSD7BQ9C0I4 1608 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 LOC105371267A0A1B0GV96 52 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 A0A1W2PN81 502 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 ODAMA1E959 279 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 J3QR06 171 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 PTBP3O95758 552 aaKnown RBP6.14□□□□□ -1.43
VCAN-202ENST00000342785 CYB5R3P00387 301 aaPredicted RBP6.14□□□□□ -1.43
VCAN-202ENST00000342785 COX7A1P24310 79 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 RPL29P47914 159 aaKnown RBP6.14□□□□□ -1.43
VCAN-202ENST00000342785 GLIPR1P48060 266 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 AMTP48728 403 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 IL36RNQ9UBH0 155 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 PRR33A8MZF0 331 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 FGF16O43320 207 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 RHBDL1O75783 438 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 GYPAP02724 150 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 HOXB1P14653 301 aaPredicted RBP6.14□□□□□ -1.43
VCAN-202ENST00000342785 TNFRSF9Q07011 255 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 HFEQ30201 348 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 TIPARPQ7Z3E1 657 aaKnown RBP6.14□□□□□ -1.43
VCAN-202ENST00000342785 LHFPL1Q86WI0 220 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 RND1Q92730 232 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 MISP3Q96FF7 219 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 HARBI1Q96MB7 349 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 SAP30LQ9HAJ7 183 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 LNP1A1A4G5 178 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 ORM2P19652 201 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 CD82P27701 267 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 FOXC1Q12948 553 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 SMIM15Q7Z3B0 74 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 WBP1Q96G27 269 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 GINS3Q9BRX5 216 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 OPN3Q9H1Y3 402 aaPredicted RBP6.14□□□□□ -1.43
VCAN-202ENST00000342785 C5orf63A6NC05 138 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 ZNF716A6NP11 495 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 F8VVB4 439 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 F8VWA3 439 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 ZG16O60844 167 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 ZNF253O75346 499 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 SLC25A5P05141 298 aaKnown RBP6.14□□□□□ -1.43
VCAN-202ENST00000342785 SPCS3P61009 180 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 RPL31P62899 125 aaKnown RBP6.14□□□□□ -1.43
VCAN-202ENST00000342785 NRN1LQ496H8 165 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 TGIF2LYQ8IUE0 185 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 TGIF2LXQ8IUE1 241 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 RBKSQ9H477 322 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 NPVFQ9HCQ7 196 aa6.14□□□□□ -1.43
VCAN-202ENST00000342785 PI4KAP42356 2102 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 DBX1A6NMT0 343 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 CAMPP49913 170 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 SUMO1P63165 101 aaKnown RBP6.13□□□□□ -1.43
VCAN-202ENST00000342785 SUPT4H1P63272 117 aaKnown RBP6.13□□□□□ -1.43
VCAN-202ENST00000342785 LSM10Q969L4 123 aaKnown RBP6.13□□□□□ -1.43
VCAN-202ENST00000342785 OR2V2Q96R30 315 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 DEPPQ9NTK1 212 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 ZNF407Q9C0G0 2248 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 ZSWIM8A7E2V4 1837 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 ZNF646O15015 1829 aaPredicted RBP6.13□□□□□ -1.43
VCAN-202ENST00000342785 DICER1Q9UPY3 1922 aaKnown RBP6.13□□□□□ -1.43
VCAN-202ENST00000342785 IGKV1-12A0A0C4DH73 117 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 MGAMO43451 1857 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 PDE6DO43924 150 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 NDUFB4O95168 129 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 IGKV1D-12P01611 117 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.13□□□□□ -1.434e-13■■■■□ 26.6
VCAN-202ENST00000342785 LOXL4Q96JB6 756 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 CCL13Q99616 98 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 MARCH11A6NNE9 402 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 J3QW42 95 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 RBP4P02753 201 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 PGA5P0DJD9 388 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 ITLN1Q8WWA0 313 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 SPG11Q96JI7 2443 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 PROB1E7EW31 1015 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 S1PR2O95136 353 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 FAM162BQ5T6X4 162 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 ABLIM2Q6H8Q1 611 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 SLC24A4Q8NFF2 622 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 RCC1LQ96I51 464 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms