RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 C9orf152Q5JTZ5 239 aa12.12□□□□□ -0.47
UBE3B-201ENST00000340074 GLDNQ6ZMI3 551 aaPredicted RBP12.12□□□□□ -0.47
UBE3B-201ENST00000340074 KLHDC1Q8N7A1 406 aa12.12□□□□□ -0.47
UBE3B-201ENST00000340074 DRAXINQ8NBI3 349 aaPredicted RBP12.12□□□□□ -0.47
UBE3B-201ENST00000340074 DYNC2LI1Q8TCX1 351 aa12.12□□□□□ -0.47
UBE3B-201ENST00000340074 CITED1Q99966 193 aa12.12□□□□□ -0.47
UBE3B-201ENST00000340074 MRPS7Q9Y2R9 242 aaKnown RBP12.12□□□□□ -0.47
UBE3B-201ENST00000340074 RBM7Q9Y580 266 aaKnown RBP12.12□□□□□ -0.47
UBE3B-201ENST00000340074 FAM25AB3EWG3 89 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 FAM25CB3EWG5 89 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 FAM25GB3EWG6 89 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 NFYAP23511 347 aaPredicted RBP12.11□□□□□ -0.47
UBE3B-201ENST00000340074 CBX5P45973 191 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 LINC00205P59089 165 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 FAM131AQ6UXB0 335 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 Q8N9W7 124 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.11□□□□□ -0.47
UBE3B-201ENST00000340074 SNAPC3Q92966 411 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 RITA1Q96K30 269 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 IFT46Q9NQC8 304 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 PLSCR3Q9NRY6 295 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 SDHAF2Q9NX18 166 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 OR5H14A6NHG9 310 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 H0YJW9 148 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 J3QRK9 145 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 PLXNB1O43157 2135 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 PEX14O75381 377 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 PRSS3P35030 304 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 ARPC4P59998 168 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 SNX29P2Q8IUI4 249 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 C5orf30Q96GV9 206 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 CCDC59Q9P031 241 aaKnown RBP12.11□□□□□ -0.47
UBE3B-201ENST00000340074 GAB2Q9UQC2 676 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 OR2W1Q9Y3N9 320 aa12.11□□□□□ -0.47
UBE3B-201ENST00000340074 CCDC160A6NGH7 325 aa12.1□□□□□ -0.47
UBE3B-201ENST00000340074 H7C2Y5 167 aa12.1□□□□□ -0.47
UBE3B-201ENST00000340074 M0R1X1 148 aa12.1□□□□□ -0.47
UBE3B-201ENST00000340074 RGS5O15539 181 aa12.1□□□□□ -0.47
UBE3B-201ENST00000340074 CNTFRP26992 372 aa12.1□□□□□ -0.47
UBE3B-201ENST00000340074 ACTBP60709 375 aa12.1□□□□□ -0.47
UBE3B-201ENST00000340074 OR8H1Q8NGG4 311 aa12.1□□□□□ -0.47
UBE3B-201ENST00000340074 OR5AN1Q8NGI8 311 aa12.1□□□□□ -0.47
UBE3B-201ENST00000340074 WNT10AQ9GZT5 417 aa12.1□□□□□ -0.47
UBE3B-201ENST00000340074 MIXL1Q9H2W2 232 aa12.1□□□□□ -0.47
UBE3B-201ENST00000340074 NECAP2Q9NVZ3 263 aa12.1□□□□□ -0.47
UBE3B-201ENST00000340074 EXTL2Q9UBQ6 330 aa12.1□□□□□ -0.47
UBE3B-201ENST00000340074 TRRAPQ9Y4A5 3859 aa12.09□□□□□ -0.47
UBE3B-201ENST00000340074 CTDSP2O14595 271 aa12.09□□□□□ -0.47
UBE3B-201ENST00000340074 MC5RP33032 325 aa12.09□□□□□ -0.47
UBE3B-201ENST00000340074 LUMP51884 338 aaPredicted RBP12.09□□□□□ -0.47
UBE3B-201ENST00000340074 MMDQ15546 238 aa12.09□□□□□ -0.47
UBE3B-201ENST00000340074 HIST2H2BDQ6DRA6 164 aa12.09□□□□□ -0.47
UBE3B-201ENST00000340074 LAX1Q8IWV1 398 aa12.09□□□□□ -0.47
UBE3B-201ENST00000340074 FAM71E2Q8N5Q1 922 aa12.09□□□□□ -0.47
UBE3B-201ENST00000340074 C11orf44Q8N8P7 122 aa12.09□□□□□ -0.47
UBE3B-201ENST00000340074 ZNF383Q8NA42 475 aa12.09□□□□□ -0.47
UBE3B-201ENST00000340074 OR5AP2Q8NGF4 316 aa12.09□□□□□ -0.47
UBE3B-201ENST00000340074 GPX8Q8TED1 209 aa12.09□□□□□ -0.47
UBE3B-201ENST00000340074 LIN7CQ9NUP9 197 aaKnown RBP12.09□□□□□ -0.47
UBE3B-201ENST00000340074 ANAPC10Q9UM13 185 aa12.09□□□□□ -0.47
UBE3B-201ENST00000340074 WASHC3Q9Y3C0 194 aa12.09□□□□□ -0.47
UBE3B-201ENST00000340074 PKD1L1Q8TDX9 2849 aa12.08□□□□□ -0.48
UBE3B-201ENST00000340074 IGKV1D-13A0A0B4J2D9 117 aa12.08□□□□□ -0.48
UBE3B-201ENST00000340074 TUSC2O75896 110 aa12.08□□□□□ -0.48
UBE3B-201ENST00000340074 IGKV1-13P0DP09 117 aa12.08□□□□□ -0.48
UBE3B-201ENST00000340074 FCGR2CP31995 323 aa12.08□□□□□ -0.48
UBE3B-201ENST00000340074 ZNF645Q8N7E2 425 aa12.08□□□□□ -0.48
UBE3B-201ENST00000340074 WIPF2Q8TF74 440 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-201ENST00000340074 RASL11BQ9BPW5 248 aa12.08□□□□□ -0.48
UBE3B-201ENST00000340074 RBM38Q9H0Z9 239 aaKnown RBP12.08□□□□□ -0.48
UBE3B-201ENST00000340074 ADAM30Q9UKF2 790 aa12.08□□□□□ -0.48
UBE3B-201ENST00000340074 IGHG2P01859 326 aa12.07□□□□□ -0.48
UBE3B-201ENST00000340074 OR5H8P0DN80 308 aa12.07□□□□□ -0.48
UBE3B-201ENST00000340074 NAT1P18440 290 aa12.07□□□□□ -0.48
UBE3B-201ENST00000340074 CDK10Q15131 360 aa12.07□□□□□ -0.48
UBE3B-201ENST00000340074 CENPVQ7Z7K6 275 aaPredicted RBP12.07□□□□□ -0.48
UBE3B-201ENST00000340074 SLIRPQ9GZT3 109 aaKnown RBP12.07□□□□□ -0.48
UBE3B-201ENST00000340074 SCPEP1Q9HB40 452 aa12.07□□□□□ -0.48
UBE3B-201ENST00000340074 LINC01548A6NM66 108 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 NBR2O15453 112 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 IGLV2-14P01704 120 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 APOA2P02652 100 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 PMP2P02689 132 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 IGKV1-16P04430 117 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 AADACP22760 399 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 RFX2P48378 723 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 THBS3P49746 956 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 RNASE12Q5GAN4 147 aaKnown RBP12.06□□□□□ -0.48
UBE3B-201ENST00000340074 SLC35E3Q7Z769 313 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 PDPNQ86YL7 162 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 NPBQ8NG41 125 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 SGMS2Q8NHU3 365 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 NOL4LQ96MY1 436 aaPredicted RBP12.06□□□□□ -0.48
UBE3B-201ENST00000340074 C6orf62Q9GZU0 229 aaPredicted RBP12.06□□□□□ -0.48
UBE3B-201ENST00000340074 EHFQ9NZC4 300 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 RSL24D1Q9UHA3 163 aaKnown RBP12.06□□□□□ -0.48
UBE3B-201ENST00000340074 VWFP04275 2813 aa12.06□□□□□ -0.48
UBE3B-201ENST00000340074 SULT1C2O00338 296 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 FBXO24O75426 580 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 RBBP9O75884 186 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms