RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 C1QL1O75973 258 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 S1PR2O95136 353 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 CGB3P0DN86 165 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 CGB7P0DN87 165 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 IAPPP10997 89 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 TNFSF4P23510 183 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 NFYBP25208 207 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 CASP6P55212 293 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 SPINK9Q5DT21 86 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 ZNF788Q6ZQV5 615 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 VKORC1L1Q8N0U8 176 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 RNASE11Q8TAA1 199 aaKnown RBP6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 CA5BP1Q8WTZ4 195 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 PRORYQ9H606 182 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 NDUFB7P17568 137 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 GZMHP20718 246 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 CHRNB4P30926 498 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 RPS16P62249 146 aaKnown RBP6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 EWSR1Q01844 656 aaKnown RBP eCLIP6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 SPAG16Q8N0X2 631 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 OR2C3Q8N628 320 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 HSD17B11Q8NBQ5 300 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 TCTEX1D2Q8WW35 142 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 SDSLQ96GA7 329 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 SLC25A32Q9H2D1 315 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 CALYQ9NYX4 217 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 HCFC1P51610 2035 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 CLEC18AA5D8T8 446 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 CLDN1O95832 211 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 F12P00748 615 aaPredicted RBP6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 CCL3L1P16619 93 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 GNG10P50151 68 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 SRPXP78539 464 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 ZNF273Q14593 569 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 CT45A1Q5HYN5 189 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 SSX9Q7RTT3 188 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 TMEM252Q8N6L7 170 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 CLEC18CQ8NCF0 446 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 CT45A3Q8NHU0 189 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 Q8TCH9 128 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 AKR1E2Q96JD6 320 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 PLEKHF2Q9H8W4 249 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 C19orf12Q9NSK7 152 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 ZNF705EA8MWA4 302 aaPredicted RBP6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 TMEM178BH3BS89 294 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 TNFRSF1AP19438 455 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 COL8A2P25067 703 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 S100GP29377 79 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 PAX5Q02548 391 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 TMEM267Q0VDI3 215 aaPredicted RBP6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 HNF4GQ14541 408 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 CR1LQ2VPA4 569 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 ZNF561Q8N587 486 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 C14orf79Q96F83 325 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 ABHD14AQ9BUJ0 271 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 MS4A7Q9GZW8 240 aaPredicted RBP6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 PLEKHA2Q9HB19 425 aa6.11□□□□□ -1.43
SRFBP1-201ENST00000339397 WNK2Q9Y3S1 2297 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 PLXNB1O43157 2135 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 TANC2Q9HCD6 1990 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 A0A1W2PPR1 153 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 VSTM5A8MXK1 200 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 AGPAT2O15120 278 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 FGF16O43320 207 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 TXNL1O43396 289 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 CD3EP07766 207 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 IRF2P14316 349 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 P2RY1P47900 373 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 HTD2P86397 168 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 TFF3Q07654 80 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 ARL16Q0P5N6 197 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 PRAMEF5Q5TYX0 476 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 OR5C1Q8NGR4 320 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 PHYHIPLQ96FC7 376 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 IFI27L2Q9H2X8 130 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 HRH4Q9H3N8 390 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 TMEM231Q9H6L2 316 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 ZNF665Q9H7R5 613 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 DYNLRB1Q9NP97 96 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 KCNJ16Q9NPI9 418 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 TMEM106BQ9NUM4 274 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 LIN7CQ9NUP9 197 aaKnown RBP6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 TAS2R3Q9NYW6 316 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 CTSZQ9UBR2 303 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 NDRG3Q9UGV2 375 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 KBTBD11-OT1A0A1B0GTJ5 212 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 A0A1B0GV50 99 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 A8MXK9 166 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 GPR137BO60478 399 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 ZG16O60844 167 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 FCGR3BO75015 233 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 CD55P08174 381 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 ADH4P08319 380 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 FGF2P09038 288 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 APOBEC3AP31941 199 aaPredicted RBP6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 DUTP33316 252 aaKnown RBP6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 DYNLT3P51808 116 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 RUNX1Q01196 453 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 TEX36Q5VZQ5 186 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 IL22RA2Q969J5 263 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms