RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 OR51S1Q8NGJ8 323 aa17.87■□□□□ 0.45
SDC3-202ENST00000339394 TERB2Q8NHR7 220 aa17.87■□□□□ 0.45
SDC3-202ENST00000339394 ZDHHC16Q969W1 377 aa17.87■□□□□ 0.45
SDC3-202ENST00000339394 C5orf30Q96GV9 206 aa17.87■□□□□ 0.45
SDC3-202ENST00000339394 TSC22D3Q99576 134 aa17.87■□□□□ 0.45
SDC3-202ENST00000339394 SLC5A7Q9GZV3 580 aa17.87■□□□□ 0.45
SDC3-202ENST00000339394 ABCB10Q9NRK6 738 aa17.87■□□□□ 0.45
SDC3-202ENST00000339394 IGHV1-3A0A0C4DH29 117 aa17.87■□□□□ 0.45
SDC3-202ENST00000339394 A0A1W2PPI3 338 aa17.87■□□□□ 0.45
SDC3-202ENST00000339394 SLC22A5O76082 557 aa17.87■□□□□ 0.45
SDC3-202ENST00000339394 Q6YL49 198 aa17.87■□□□□ 0.45
SDC3-202ENST00000339394 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.87■□□□□ 0.45
SDC3-202ENST00000339394 FXYD6Q9H0Q3 95 aa17.87■□□□□ 0.45
SDC3-202ENST00000339394 CCL28Q9NRJ3 127 aa17.87■□□□□ 0.45
SDC3-202ENST00000339394 VGLL3A8MV65 326 aa17.86■□□□□ 0.45
SDC3-202ENST00000339394 TXNL1O43396 289 aa17.86■□□□□ 0.45
SDC3-202ENST00000339394 GNRHRP30968 328 aa17.86■□□□□ 0.45
SDC3-202ENST00000339394 RAB13P51153 203 aa17.86■□□□□ 0.45
SDC3-202ENST00000339394 OR8H3Q8N146 312 aa17.86■□□□□ 0.45
SDC3-202ENST00000339394 DRAM1Q8N682 238 aa17.86■□□□□ 0.45
SDC3-202ENST00000339394 SSX3Q99909 188 aa17.86■□□□□ 0.45
SDC3-202ENST00000339394 PRRT1Q99946 306 aa17.86■□□□□ 0.45
SDC3-202ENST00000339394 SLC2A8Q9NY64 477 aa17.86■□□□□ 0.45
SDC3-202ENST00000339394 TIMM23O14925 209 aa17.85■□□□□ 0.45
SDC3-202ENST00000339394 UPK1BO75841 260 aa17.85■□□□□ 0.45
SDC3-202ENST00000339394 CT45A6P0DMU7 189 aa17.85■□□□□ 0.45
SDC3-202ENST00000339394 CT45A5P0DMU8 189 aa17.85■□□□□ 0.45
SDC3-202ENST00000339394 CT45A7P0DMV0 189 aa17.85■□□□□ 0.45
SDC3-202ENST00000339394 LINC00205P59089 165 aa17.85■□□□□ 0.45
SDC3-202ENST00000339394 RBMS3Q6XE24 437 aaKnown RBP17.85■□□□□ 0.45
SDC3-202ENST00000339394 IDO2Q6ZQW0 420 aa17.85■□□□□ 0.45
SDC3-202ENST00000339394 ZNF818PQ6ZRF7 136 aa17.85■□□□□ 0.45
SDC3-202ENST00000339394 DRAXINQ8NBI3 349 aaPredicted RBP17.85■□□□□ 0.45
SDC3-202ENST00000339394 MRGPRFQ96AM1 343 aa17.85■□□□□ 0.45
SDC3-202ENST00000339394 MRPL20Q9BYC9 149 aaKnown RBP17.85■□□□□ 0.45
SDC3-202ENST00000339394 SCP2D1Q9UJQ7 156 aa17.85■□□□□ 0.45
SDC3-202ENST00000339394 M0R1X1 148 aa17.84■□□□□ 0.45
SDC3-202ENST00000339394 IER3P46695 156 aa17.84■□□□□ 0.45
SDC3-202ENST00000339394 ARHGDIBP52566 201 aa17.84■□□□□ 0.45
SDC3-202ENST00000339394 UCP3P55916 312 aa17.84■□□□□ 0.45
SDC3-202ENST00000339394 AANATQ16613 207 aa17.84■□□□□ 0.45
SDC3-202ENST00000339394 MOB3BQ86TA1 216 aa17.84■□□□□ 0.45
SDC3-202ENST00000339394 PIFOQ8TCI5 191 aa17.84■□□□□ 0.45
SDC3-202ENST00000339394 NABP2Q9BQ15 211 aa17.84■□□□□ 0.45
SDC3-202ENST00000339394 PLA2G10O15496 165 aa17.83■□□□□ 0.45
SDC3-202ENST00000339394 IGHV4-59P01825 116 aa17.83■□□□□ 0.45
SDC3-202ENST00000339394 BRS3P32247 399 aa17.83■□□□□ 0.45
SDC3-202ENST00000339394 DYNLT3P51808 116 aa17.83■□□□□ 0.45
SDC3-202ENST00000339394 IFITM3Q01628 133 aa17.83■□□□□ 0.45
SDC3-202ENST00000339394 LRRC75BQ2VPJ9 315 aa17.83■□□□□ 0.45
SDC3-202ENST00000339394 OR13C8Q8NGS7 320 aa17.83■□□□□ 0.45
SDC3-202ENST00000339394 CFHR4Q92496 578 aa17.83■□□□□ 0.45
SDC3-202ENST00000339394 IGHV3-72A0A0B4J1Y9 119 aa17.83■□□□□ 0.44
SDC3-202ENST00000339394 HOXA3O43365 443 aaPredicted RBP17.83■□□□□ 0.44
SDC3-202ENST00000339394 CD24P25063 80 aa17.83■□□□□ 0.44
SDC3-202ENST00000339394 BAMBIQ13145 260 aa17.83■□□□□ 0.44
SDC3-202ENST00000339394 HABP2Q14520 560 aaPredicted RBP17.83■□□□□ 0.44
SDC3-202ENST00000339394 MSMO1Q15800 293 aa17.83■□□□□ 0.44
SDC3-202ENST00000339394 LPCAT3Q6P1A2 487 aa17.83■□□□□ 0.44
SDC3-202ENST00000339394 LURAP1LQ8IV03 231 aa17.83■□□□□ 0.44
SDC3-202ENST00000339394 ZNF418Q8TF45 676 aaPredicted RBP17.83■□□□□ 0.44
SDC3-202ENST00000339394 SSMEM1Q8WWF3 244 aa17.83■□□□□ 0.44
SDC3-202ENST00000339394 AKR1E2Q96JD6 320 aa17.83■□□□□ 0.44
SDC3-202ENST00000339394 CENPXA8MT69 81 aa17.82■□□□□ 0.44
SDC3-202ENST00000339394 H3BUX3 64 aa17.82■□□□□ 0.44
SDC3-202ENST00000339394 EIF4EBP1Q13541 118 aaPredicted RBP17.82■□□□□ 0.44
SDC3-202ENST00000339394 GLDNQ6ZMI3 551 aaPredicted RBP17.82■□□□□ 0.44
SDC3-202ENST00000339394 ZBTB34Q8NCN2 500 aa17.82■□□□□ 0.44
SDC3-202ENST00000339394 BVESQ8NE79 360 aa17.82■□□□□ 0.44
SDC3-202ENST00000339394 GPHA2Q96T91 129 aa17.82■□□□□ 0.44
SDC3-202ENST00000339394 C7orf50Q9BRJ6 194 aaKnown RBP17.82■□□□□ 0.44
SDC3-202ENST00000339394 RSRP1Q9BUV0 290 aa17.82■□□□□ 0.44
SDC3-202ENST00000339394 NAP1L6A6NFF2 107 aa17.81■□□□□ 0.44
SDC3-202ENST00000339394 TNFSF12O43508 249 aa17.81■□□□□ 0.44
SDC3-202ENST00000339394 DUTP33316 252 aaKnown RBP17.81■□□□□ 0.44
SDC3-202ENST00000339394 SLC38A6Q8IZM9 456 aa17.81■□□□□ 0.44
SDC3-202ENST00000339394 ZNF383Q8NA42 475 aa17.81■□□□□ 0.44
SDC3-202ENST00000339394 MARCH1Q8TCQ1 289 aa17.81■□□□□ 0.44
SDC3-202ENST00000339394 BORCS5Q969J3 196 aa17.81■□□□□ 0.44
SDC3-202ENST00000339394 RBMXL1Q96E39 390 aaKnown RBP17.81■□□□□ 0.44
SDC3-202ENST00000339394 DPAGT1Q9H3H5 408 aa17.81■□□□□ 0.44
SDC3-202ENST00000339394 FAM90A9PA6NNJ1 464 aa17.8■□□□□ 0.44
SDC3-202ENST00000339394 GPR31O00270 319 aa17.8■□□□□ 0.44
SDC3-202ENST00000339394 PGAM2P15259 253 aa17.8■□□□□ 0.44
SDC3-202ENST00000339394 ECI1P42126 302 aa17.8■□□□□ 0.44
SDC3-202ENST00000339394 CMTM1Q8IZ96 169 aa17.8■□□□□ 0.44
SDC3-202ENST00000339394 OR5AN1Q8NGI8 311 aa17.8■□□□□ 0.44
SDC3-202ENST00000339394 CAPSLQ8WWF8 208 aa17.8■□□□□ 0.44
SDC3-202ENST00000339394 ESM1Q9NQ30 184 aa17.8■□□□□ 0.44
SDC3-202ENST00000339394 TBC1D24Q9ULP9 559 aa17.8■□□□□ 0.44
SDC3-202ENST00000339394 LINC00473A8K010 186 aa17.79■□□□□ 0.44
SDC3-202ENST00000339394 LYRM1O43325 122 aa17.79■□□□□ 0.44
SDC3-202ENST00000339394 PI3P19957 117 aa17.79■□□□□ 0.44
SDC3-202ENST00000339394 CD1BP29016 333 aa17.79■□□□□ 0.44
SDC3-202ENST00000339394 HILS1P60008 231 aa17.79■□□□□ 0.44
SDC3-202ENST00000339394 OR5R1Q8NH85 324 aa17.79■□□□□ 0.44
SDC3-202ENST00000339394 DUX5Q96PT3 197 aa17.79■□□□□ 0.44
SDC3-202ENST00000339394 HSD17B10Q99714 261 aaKnown RBP17.79■□□□□ 0.44
SDC3-202ENST00000339394 TNFRSF19Q9NS68 423 aa17.79■□□□□ 0.44
SDC3-202ENST00000339394 NF1P21359 2839 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms