RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 ADTRPQ96IZ2 230 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 NAA60Q9H7X0 242 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 AUP1Q9Y679 476 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 CSPG4Q6UVK1 2322 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 A0A0B4J293 547 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 PIGBOS1A0A0B4J2F0 54 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 ODF3BA8MYP8 253 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 TXNL1O43396 289 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 PGLYRP1O75594 196 aaPredicted RBP11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 DUS4LO95620 317 aaKnown RBP11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 IFNA2P01563 188 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 VSIG10L2P0DP72 767 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 CEACAM3P40198 252 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 UBE2E1P51965 193 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 PPP1R1AQ13522 171 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 CYB5R2Q6BCY4 276 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 TBC1D26Q86UD7 250 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 ODF3L1Q8IXM7 274 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 TCTEX1D1Q8N7M0 179 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 MAPK1IP1LQ8NDC0 245 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 TBX15Q96SF7 602 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 BEX2Q9BXY8 128 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 BEX1Q9HBH7 125 aa11.84□□□□□ -0.51
NIPAL3-202ENST00000339255 CSMD1Q96PZ7 3565 aa11.83□□□□□ -0.52
NIPAL3-202ENST00000339255 H0Y980 276 aa11.83□□□□□ -0.52
NIPAL3-202ENST00000339255 RNASEK-C17orf49H0YIS7 233 aa11.83□□□□□ -0.52
NIPAL3-202ENST00000339255 TGFAP01135 160 aa11.83□□□□□ -0.52
NIPAL3-202ENST00000339255 F2RP25116 425 aa11.83□□□□□ -0.52
NIPAL3-202ENST00000339255 SUPT4H1P63272 117 aaKnown RBP11.83□□□□□ -0.52
NIPAL3-202ENST00000339255 HCP5Q6MZN7 132 aa11.83□□□□□ -0.52
NIPAL3-202ENST00000339255 ZNF833PQ6ZTB9 187 aa11.83□□□□□ -0.52
NIPAL3-202ENST00000339255 OR4P4Q8NGL7 312 aa11.83□□□□□ -0.52
NIPAL3-202ENST00000339255 ZNF431Q8TF32 576 aaPredicted RBP11.83□□□□□ -0.52
NIPAL3-202ENST00000339255 C7orf69Q9H7B7 122 aa11.83□□□□□ -0.52
NIPAL3-202ENST00000339255 FAM212BQ9NTI7 297 aaPredicted RBP11.83□□□□□ -0.52
NIPAL3-202ENST00000339255 ALG5Q9Y673 324 aa11.83□□□□□ -0.52
NIPAL3-202ENST00000339255 A0A0A6YYJ9 748 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 C3orf85A0A1B0GTC6 90 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 C9orf170A2RU37 121 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 BUB1B-PAK6H3BSN5 160 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 M0R1X1 148 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 SFT2D2O95562 160 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 ARG1P05089 322 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 HTR1DP28221 377 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 SRPXP78539 464 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 EIF4EBP1Q13541 118 aaPredicted RBP11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 RPL39P5Q59GN2 51 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 MINOS1Q5TGZ0 78 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 ST6GALNAC6Q969X2 333 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 PHB2Q99623 299 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 ZNF251Q9BRH9 671 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 SEC22CQ9BRL7 303 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 TBL2Q9Y4P3 447 aaKnown RBP11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 MINOS1-NBL1R4GNA1 71 aa11.82□□□□□ -0.52
NIPAL3-202ENST00000339255 LEUTXA8MZ59 168 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 TNFSF12O43508 249 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 DLX1P56177 255 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 LGALS4P56470 323 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 TAGLNQ01995 201 aaKnown RBP11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 CBX3Q13185 183 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 KLRD1Q13241 179 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 MIDNQ504T8 468 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 OR51H1Q8NH63 302 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 CD300LFQ8TDQ1 290 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 MITD1Q8WV92 249 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 C5orf30Q96GV9 206 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 TMEM222Q9H0R3 208 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 PRELID3BQ9Y3B1 194 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 ACANP16112 2415 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 A0A0B4J2A0 478 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 OOSP1A8MZH6 123 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 PROP1O75360 226 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 DUTP33316 252 aaKnown RBP11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 KIR2DS2P43631 304 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 THBS3P49746 956 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 GPR157Q5UAW9 335 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 TGIF2LXQ8IUE1 241 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 COQ8AQ8NI60 647 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 TCTEX1D2Q8WW35 142 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 LHX4Q969G2 390 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 RPEQ96AT9 228 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 OR51J1Q9H342 316 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 ZNRD1Q9P1U0 126 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 DPM3Q9P2X0 92 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 SHPKQ9UHJ6 478 aa11.81□□□□□ -0.52
NIPAL3-202ENST00000339255 TEX15Q9BXT5 2789 aa11.8□□□□□ -0.52
NIPAL3-202ENST00000339255 VPS13CQ709C8 3753 aa11.8□□□□□ -0.52
NIPAL3-202ENST00000339255 RBFOX2O43251 390 aaKnown RBP eCLIP11.8□□□□□ -0.523e-10■■■■■ 36
NIPAL3-202ENST00000339255 GAPDHP04406 335 aaKnown RBP11.8□□□□□ -0.52
NIPAL3-202ENST00000339255 OR5AC1P0C628 307 aa11.8□□□□□ -0.52
NIPAL3-202ENST00000339255 RPA2P15927 270 aa11.8□□□□□ -0.52
NIPAL3-202ENST00000339255 EPHA1P21709 976 aa11.8□□□□□ -0.52
NIPAL3-202ENST00000339255 CCDC144NLQ6NUI1 221 aa11.8□□□□□ -0.52
NIPAL3-202ENST00000339255 TEX29Q8N6K0 151 aa11.8□□□□□ -0.52
NIPAL3-202ENST00000339255 OR52B4Q8NGK2 314 aa11.8□□□□□ -0.52
NIPAL3-202ENST00000339255 CASTOR1Q8WTX7 329 aa11.8□□□□□ -0.52
NIPAL3-202ENST00000339255 TP53RKQ96S44 253 aa11.8□□□□□ -0.52
NIPAL3-202ENST00000339255 ITGB1BP2Q9UKP3 347 aa11.8□□□□□ -0.52
NIPAL3-202ENST00000339255 IGHV1-69DA0A0B4J2H0 117 aa11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 CENPVL3A0A0U1RRI6 287 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 232.5 ms