RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 F5H697 171 aa11.83□□□□□ -0.51
RTN4-202ENST00000337526 ZNF25P17030 456 aaPredicted RBP11.83□□□□□ -0.51
RTN4-202ENST00000337526 RIGQ13278 110 aa11.83□□□□□ -0.51
RTN4-202ENST00000337526 WDFY1Q8IWB7 410 aa11.83□□□□□ -0.51
RTN4-202ENST00000337526 OR1L1Q8NH94 360 aa11.83□□□□□ -0.51
RTN4-202ENST00000337526 TXNDC17Q9BRA2 123 aa11.83□□□□□ -0.51
RTN4-202ENST00000337526 ASCL3Q9NQ33 180 aa11.83□□□□□ -0.51
RTN4-202ENST00000337526 CLEC5AQ9NY25 188 aa11.83□□□□□ -0.51
RTN4-202ENST00000337526 MPTX1A8MV57 137 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 ISLRO14498 428 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 EIF3GO75821 320 aaKnown RBP eCLIP11.83□□□□□ -0.524e-6■■■□□ 15.9
RTN4-202ENST00000337526 TMEM187Q14656 261 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 Q1RN00 199 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 GPR61Q9BZJ8 451 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 LOC101059948A0A1B0GTJ6 334 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 APCSP02743 223 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 C1QL2Q7Z5L3 287 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 P2RX4Q99571 388 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 RBKSQ9H477 322 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 NAGKQ9UJ70 344 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 BRS3P32247 399 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 ZDHHC16Q969W1 377 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 MAP1LC3CQ9BXW4 147 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 PKIBQ9C010 78 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 ARID2Q68CP9 1835 aa11.83□□□□□ -0.52
RTN4-202ENST00000337526 TGFBR3LH3BV60 316 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 SCGB1C2P0DMR2 95 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 UCP3P55916 312 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 Q8WTZ3 238 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 FAM222BQ8WU58 562 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 FAM216AQ8WUB2 273 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 WNT5BQ9H1J7 359 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 NBASA2RRP1 2371 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 C16orf97H3BN30 126 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 RAMP1O60894 148 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 ADAM11O75078 769 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 MELTFP08582 738 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 PRDM14Q9GZV8 571 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 SPAARA0A1B0GVQ0 90 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 DIRC3C9JPN6 131 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 FAM90A26D6RGX4 464 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 ZNF645Q8N7E2 425 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 SAP25Q8TEE9 199 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 DNASE2BQ8WZ79 361 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 PAXXQ9BUH6 204 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 IL17BQ9UHF5 180 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 ARHGEF17Q96PE2 2063 aaPredicted RBP11.82□□□□□ -0.52
RTN4-202ENST00000337526 IGKV1D-43A0A0B4J1Z2 117 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 A0A1W2PR77 199 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 K7N7A8 449 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 ADRA2AP08913 450 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 P2RY6Q15077 328 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 WDR25Q64LD2 544 aaPredicted RBP11.82□□□□□ -0.52
RTN4-202ENST00000337526 LINC00114Q6XXX2 140 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 ZNF818PQ6ZRF7 136 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 C1orf174Q8IYL3 243 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 HIST1H2BAQ96A08 127 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 GRAMD2BQ96HH9 432 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 SOSTQ9BQB4 213 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 TMUB1Q9BVT8 246 aa11.82□□□□□ -0.52
RTN4-202ENST00000337526 CXorf65A6NEN9 183 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 OR2T8A6NH00 312 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 ORM1P02763 201 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 LGALS7P47929 136 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 LBHQ53QV2 105 aaPredicted RBP11.81□□□□□ -0.52
RTN4-202ENST00000337526 C10orf128Q5T292 105 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 SLC25A10Q9UBX3 287 aaPredicted RBP11.81□□□□□ -0.52
RTN4-202ENST00000337526 UFC1Q9Y3C8 167 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 LOC390937A0A1W2PQ73 354 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 EPOPA6NHQ4 379 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 M0R296 226 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 ZNF137PP52743 207 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 CCL13Q99616 98 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 CHRNA10Q9GZZ6 450 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 C1RLQ9NZP8 487 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 PPIAL4EA0A075B759 164 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 TGIF2-C20orf24A0A0A6YYL0 155 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 IGHV3-21A0A0B4J1V1 117 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 A8MXK9 166 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 PPIAL4DF5H284 164 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 CORTO00230 105 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 PPIAL4FP0DN26 164 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 HIST1H1BP16401 226 aaKnown RBP11.81□□□□□ -0.52
RTN4-202ENST00000337526 TNFRSF9Q07011 255 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 PCOLCEQ15113 449 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 SAXO1Q8IYX7 474 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 HSPB9Q9BQS6 159 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 SRXN1Q9BYN0 137 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 ZNF552Q9H707 407 aaPredicted RBP11.81□□□□□ -0.52
RTN4-202ENST00000337526 PPIAL4AQ9Y536 164 aa11.81□□□□□ -0.52
RTN4-202ENST00000337526 TIAF1O95411 115 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 SRP14P37108 136 aaKnown RBP11.8□□□□□ -0.52
RTN4-202ENST00000337526 PAFAH1B2P68402 229 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 TMEM97Q5BJF2 176 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 MIC13Q5XKP0 118 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 OR8B3Q8NGG8 313 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 OR8B2Q96RD0 313 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 HEXA-AS1Q9H8Q6 139 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 COA4Q9NYJ1 87 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 ACACAQ13085 2346 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms