RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 UMODP07911 640 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 KIAA1644Q3SXP7 199 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 LRRC29Q8WV35 223 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 RNF2Q99496 336 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 INTS1Q8N201 2190 aaKnown RBP13.88□□□□□ -0.19
NPHP3-201ENST00000337331 DOCK11Q5JSL3 2073 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 HEATR5BQ9P2D3 2071 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 TRDCB7Z8K6 153 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 NDUFS8O00217 210 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 TSPAN2O60636 221 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 SMIM10L1P0DMW3 83 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 CEACAM8P31997 349 aaPredicted RBP13.88□□□□□ -0.19
NPHP3-201ENST00000337331 TSPAN7P41732 249 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 RPL11P62913 178 aaKnown RBP13.88□□□□□ -0.19
NPHP3-201ENST00000337331 SLC35B1P78383 322 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 PLPPR5Q32ZL2 321 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 CTHRC1Q96CG8 243 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 SMIM10Q96HG1 83 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 DOCK9Q9BZ29 2069 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 GPR179Q6PRD1 2367 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 GDF9O60383 454 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 GPHA2Q96T91 129 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 OR2H1Q9GZK4 316 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 MYO16Q9Y6X6 1858 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 A0A0J9YW62 118 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 M0QZ24 198 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 CDS2O95674 445 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 EGR1P18146 543 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 CT55Q8WUE5 264 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 HES4Q9HCC6 221 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 SLC7A10Q9NS82 523 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 CISD1Q9NZ45 108 aaKnown RBP13.87□□□□□ -0.19
NPHP3-201ENST00000337331 UBE2V1Q13404 147 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 ACSM6Q6P461 480 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 CALHM1Q8IU99 346 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 MEGF9Q9H1U4 602 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 TMEM38BQ9NVV0 291 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 TUBD1Q9UJT1 453 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 LIFP15018 202 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 TNFRSF1AP19438 455 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 FSTP19883 344 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 CBLN1P23435 193 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 GPR35Q9HC97 309 aa13.87□□□□□ -0.19
NPHP3-201ENST00000337331 IGLV1-36A0A0B4J1U3 117 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 PATE3B3GLJ2 98 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 CYC1P08574 325 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 HIST3H3Q16695 136 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 TRGV8A0A0C4DH27 118 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 SRP14P37108 136 aaKnown RBP13.86□□□□□ -0.19
NPHP3-201ENST00000337331 MAGEA5P43359 124 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 ANKRD39Q53RE8 183 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 PAQR4Q8N4S7 273 aaPredicted RBP13.86□□□□□ -0.19
NPHP3-201ENST00000337331 ATRXP46100 2492 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 CRYM-AS1A6NIL9 109 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 BCL3P20749 454 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 ZP4Q12836 540 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.86□□□□□ -0.19
NPHP3-201ENST00000337331 TMEM211Q6ICI0 200 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 OR5D13Q8NGL4 314 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 R4GN57 208 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 CACNA1HO95180 2353 aa13.86□□□□□ -0.19
NPHP3-201ENST00000337331 IGSF23A1L1A6 192 aa13.85□□□□□ -0.19
NPHP3-201ENST00000337331 M0R2Z0 102 aa13.85□□□□□ -0.19
NPHP3-201ENST00000337331 SUPT4H1P63272 117 aaKnown RBP13.85□□□□□ -0.19
NPHP3-201ENST00000337331 IGFBP7Q16270 282 aa13.85□□□□□ -0.19
NPHP3-201ENST00000337331 MRGPRFQ96AM1 343 aa13.85□□□□□ -0.19
NPHP3-201ENST00000337331 GNB4Q9HAV0 340 aa13.85□□□□□ -0.19
NPHP3-201ENST00000337331 FHL5Q5TD97 284 aa13.85□□□□□ -0.19
NPHP3-201ENST00000337331 TGIF2LYQ8IUE0 185 aa13.85□□□□□ -0.19
NPHP3-201ENST00000337331 PARP14Q460N5 1801 aa13.85□□□□□ -0.19
NPHP3-201ENST00000337331 TMEM147Q9BVK8 224 aa13.85□□□□□ -0.19
NPHP3-201ENST00000337331 GNG7O60262 68 aa13.85□□□□□ -0.19
NPHP3-201ENST00000337331 ARL16Q0P5N6 197 aa13.85□□□□□ -0.19
NPHP3-201ENST00000337331 MRPL54Q6P161 138 aaKnown RBP13.85□□□□□ -0.19
NPHP3-201ENST00000337331 TMEM204Q9BSN7 226 aa13.85□□□□□ -0.19
NPHP3-201ENST00000337331 MRPL18Q9H0U6 180 aaKnown RBP13.85□□□□□ -0.19
NPHP3-201ENST00000337331 IGKV1D-42A0A075B6H8 117 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 C17orf51A8MQB3 221 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 KBTBD11O94819 623 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 CD55P08174 381 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 C1orf210Q8IVY1 113 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 MAFAQ8NHW3 353 aaPredicted RBP13.84□□□□□ -0.19
NPHP3-201ENST00000337331 RNASEH2CQ8TDP1 164 aaKnown RBP13.84□□□□□ -0.19
NPHP3-201ENST00000337331 KLK10O43240 276 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 PLP1P60201 277 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 FAM27BQ5VT28 67 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 TCF23Q7RTU1 214 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 P2RX4Q99571 388 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 WNK2Q9Y3S1 2297 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 BMPR1BO00238 502 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 SERF1AO75920 110 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 CELA2AP08217 269 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 KCNK17Q96T54 332 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 NCOR1P1Q9H4R4 102 aa13.84□□□□□ -0.19
NPHP3-201ENST00000337331 DPRXA6NFQ7 191 aa13.83□□□□□ -0.19
NPHP3-201ENST00000337331 NDUFB3O43676 98 aa13.83□□□□□ -0.19
NPHP3-201ENST00000337331 NDUFB4O95168 129 aa13.83□□□□□ -0.19
NPHP3-201ENST00000337331 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.19
NPHP3-201ENST00000337331 ST6GALNAC6Q969X2 333 aa13.83□□□□□ -0.19
NPHP3-201ENST00000337331 IL36GQ9NZH8 169 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms