RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 FAM216AQ8WUB2 273 aa10.66□□□□□ -0.7
FN1-202ENST00000336916 HOXB3P14651 431 aaPredicted RBP10.65□□□□□ -0.7
FN1-202ENST00000336916 AESQ08117 197 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 PQLC2Q6ZP29 291 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 GHRHP01286 108 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 WNT1P04628 370 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 ST3GAL2Q16842 350 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 AMER3Q8N944 861 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 PRSS50Q9UI38 385 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 IGHV3-43A0A0B4J1X8 118 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 GCGP01275 180 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 IGHV3-43DP0DP04 118 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 AANATQ16613 207 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 BSXQ3C1V8 233 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 TMEM186Q96B77 213 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 MS4A10Q96PG2 267 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 MRPS18CQ9Y3D5 142 aaKnown RBP10.65□□□□□ -0.7
FN1-202ENST00000336916 PHLDA3Q9Y5J5 127 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 APOBEC3AP31941 199 aaPredicted RBP10.65□□□□□ -0.7
FN1-202ENST00000336916 PMS2P11Q13670 270 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 STPG2Q8N412 459 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 EEF1AKMT3Q96AZ1 226 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 LOC105371242A0A075B767 164 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 HPXP02790 462 aa10.65□□□□□ -0.7
FN1-202ENST00000336916 ACAA2P42765 397 aaKnown RBP10.65□□□□□ -0.7
FN1-202ENST00000336916 SPINT1O43278 529 aa10.65□□□□□ -0.71
FN1-202ENST00000336916 MNX1P50219 401 aaPredicted RBP10.65□□□□□ -0.71
FN1-202ENST00000336916 FAM222BQ8WU58 562 aa10.65□□□□□ -0.71
FN1-202ENST00000336916 TMEM70Q9BUB7 260 aa10.65□□□□□ -0.71
FN1-202ENST00000336916 M0R3E3 92 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 FAM53AQ6NSI3 398 aaPredicted RBP10.64□□□□□ -0.71
FN1-202ENST00000336916 Q6ZT83 130 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 ZNF383Q8NA42 475 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 QTRT1Q9BXR0 403 aaKnown RBP10.64□□□□□ -0.71
FN1-202ENST00000336916 ALX4Q9H161 411 aaPredicted RBP10.64□□□□□ -0.71
FN1-202ENST00000336916 A0A1B0GTL3 188 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 IL22RA2Q969J5 263 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 CLEC7AQ9BXN2 247 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 MSL2Q9HCI7 577 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 LOC390937A0A1W2PQ73 354 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 COX6CP09669 75 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 PDZD11Q5EBL8 140 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 XAF1Q6GPH4 301 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 MSRB3Q8IXL7 192 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 DLL1O00548 723 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 ASAH2BP0C7U1 165 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 FAM3BP58499 235 aaPredicted RBP10.64□□□□□ -0.71
FN1-202ENST00000336916 SCARF2Q96GP6 870 aaPredicted RBP10.64□□□□□ -0.71
FN1-202ENST00000336916 DCTN5Q9BTE1 182 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 ATXN7O15265 892 aaPredicted RBP10.64□□□□□ -0.71
FN1-202ENST00000336916 SRSF10O75494 262 aaKnown RBP10.64□□□□□ -0.71
FN1-202ENST00000336916 CD1BP29016 333 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 MUC6Q6W4X9 2439 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 LTBP1Q14766 1721 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 GLRXP35754 106 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 TIAL1Q01085 375 aaKnown RBP eCLIP10.64□□□□□ -0.714e-7■■■□□ 14.7
FN1-202ENST00000336916 OR1K1Q8NGR3 316 aa10.64□□□□□ -0.71
FN1-202ENST00000336916 CLDN14O95500 239 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 SEC11BP0C7V7 166 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 ERVS71-1P61550 626 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 NAAAQ02083 359 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 TWIST1Q15672 202 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 HBZP02008 142 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 TMEM50BP56557 158 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 FAM90A1Q86YD7 464 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 UCN2Q96RP3 112 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 PF4P02776 101 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 BTF3P20290 206 aaKnown RBP10.63□□□□□ -0.71
FN1-202ENST00000336916 PLPPR2Q96GM1 343 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 LINC00470Q9BZP3 86 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 SRSF9Q13242 221 aaKnown RBP eCLIP10.63□□□□□ -0.71
FN1-202ENST00000336916 SLC22A18ASQ8N1D0 253 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 RELL2Q8NC24 303 aaPredicted RBP10.63□□□□□ -0.71
FN1-202ENST00000336916 ZFP30Q9Y2G7 519 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 CDRT15L2A8MXV6 281 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 FOXS1O43638 330 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 TRGC1P0CF51 173 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 ATP5G2Q06055 141 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 RALYQ9UKM9 306 aaKnown RBP10.63□□□□□ -0.71
FN1-202ENST00000336916 FAM208BQ5VWN6 2430 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 FBLL1A6NHQ2 334 aaKnown RBP10.63□□□□□ -0.71
FN1-202ENST00000336916 H3BMH7 237 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 CAMPP49913 170 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 FLRT3Q9NZU0 649 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 FAM181BA6NEQ2 426 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 H7C1H1 209 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 POLR2GP62487 172 aaKnown RBP eCLIP10.63□□□□□ -0.71
FN1-202ENST00000336916 TMEM88Q6PEY1 159 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 C16orf47Q6ZP98 133 aaPredicted RBP10.63□□□□□ -0.71
FN1-202ENST00000336916 ADAMTS17Q8TE56 1095 aa10.63□□□□□ -0.71
FN1-202ENST00000336916 APCSP02743 223 aa10.62□□□□□ -0.71
FN1-202ENST00000336916 TOMM20LQ6UXN7 152 aa10.62□□□□□ -0.71
FN1-202ENST00000336916 hCG_38984A0A1B0GV85 526 aa10.62□□□□□ -0.71
FN1-202ENST00000336916 TMEM218A2RU14 115 aa10.62□□□□□ -0.71
FN1-202ENST00000336916 ZNF729A6NN14 1252 aaPredicted RBP10.62□□□□□ -0.71
FN1-202ENST00000336916 MAS1LP35410 378 aa10.62□□□□□ -0.71
FN1-202ENST00000336916 PPOXP50336 477 aa10.62□□□□□ -0.71
FN1-202ENST00000336916 PIGYQ3MUY2 71 aa10.62□□□□□ -0.71
FN1-202ENST00000336916 RTN4RL2Q86UN3 420 aa10.62□□□□□ -0.71
FN1-202ENST00000336916 TMEM229AB2RXF0 380 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms