RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 CRISPLD2Q9H0B8 497 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 PARLQ9H300 379 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 TRBV9A0A0B4J1U6 114 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 TRBV5-5A0A0J9YX44 114 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 AGFG2O95081 481 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 S1PR2O95136 353 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 DMRTA1Q5VZB9 504 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 OR13C6PQ8NH95 151 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 ZNF430Q9H8G1 570 aaPredicted RBP11.34□□□□□ -0.59
HLCS-201ENST00000336648 ZNF71Q9NQZ8 489 aaPredicted RBP11.34□□□□□ -0.59
HLCS-201ENST00000336648 ZDHHC8Q9ULC8 765 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 BTAF1O14981 1849 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 ISG15P05161 165 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 TMEM252Q8N6L7 170 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 GALNT14Q96FL9 552 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 AHRRA9YTQ3 701 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 PAPPA-AS1Q5QFB9 102 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 FADS6Q8N9I5 356 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 YBX2Q9Y2T7 364 aaKnown RBP11.33□□□□□ -0.6
HLCS-201ENST00000336648 CA1P00915 261 aaPredicted RBP11.33□□□□□ -0.6
HLCS-201ENST00000336648 TNFSF10P50591 281 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 GZMMP51124 257 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 MEF2BQ02080 365 aaPredicted RBP11.33□□□□□ -0.6
HLCS-201ENST00000336648 TTTY12Q9BZ98 90 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 FCARP24071 287 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 ZFP36L2P47974 494 aaKnown RBP11.33□□□□□ -0.6
HLCS-201ENST00000336648 ZNF658BQ4V348 819 aaPredicted RBP11.33□□□□□ -0.6
HLCS-201ENST00000336648 CYB5R2Q6BCY4 276 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 OR5A1Q8NGJ0 315 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 UCN2Q96RP3 112 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 PPP1R3EQ9H7J1 279 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 WBP1LQ9NX94 342 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 HSPB7Q9UBY9 170 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 R4GN57 208 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 RECKO95980 971 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 CYB561D1Q8N8Q1 229 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 PCGF1Q9BSM1 259 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 TMEM56-RWDD3S4R434 201 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 TRBV23-1A0A0A0MS06 115 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 C2orf83Q53S99 150 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 CLDN16Q9Y5I7 305 aa11.33□□□□□ -0.6
HLCS-201ENST00000336648 EIF3GO75821 320 aaKnown RBP eCLIP11.32□□□□□ -0.6
HLCS-201ENST00000336648 CCL4P13236 92 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 OTX1P32242 354 aaPredicted RBP11.32□□□□□ -0.6
HLCS-201ENST00000336648 RPL8P62917 257 aaKnown RBP11.32□□□□□ -0.6
HLCS-201ENST00000336648 LAMTOR1Q6IAA8 161 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 UCP2P55851 309 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 C1orf100Q5SVJ3 147 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 GPR132Q9UNW8 380 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 OR2A4O95047 310 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 COX5BP10606 129 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 MPV17P39210 176 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 MGAT2Q10469 447 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 C16orf92Q96LL3 132 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 OR2A7Q96R45 310 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 WNT5BQ9H1J7 359 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
HLCS-201ENST00000336648 RRN3P1Q2M238 152 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 SLX4Q8IY92 1834 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 LINC00869P0C866 280 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 TSPOP30536 169 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 FAM214BQ7L5A3 538 aa11.32□□□□□ -0.6
HLCS-201ENST00000336648 FHITP49789 147 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 DLX6P56179 175 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 CLEC2AQ6UVW9 174 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 NEUROG1Q92886 237 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 MRPS18BQ9Y676 258 aaKnown RBP11.31□□□□□ -0.6
HLCS-201ENST00000336648 PRR33A8MZF0 331 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 J3QW42 95 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 FOXS1O43638 330 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 F12P00748 615 aaPredicted RBP11.31□□□□□ -0.6
HLCS-201ENST00000336648 PRF1P14222 555 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 FCGR2BP31994 310 aaPredicted RBP11.31□□□□□ -0.6
HLCS-201ENST00000336648 TM4SF20Q53R12 229 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 LOXL4Q96JB6 756 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 CISD1Q9NZ45 108 aaKnown RBP11.31□□□□□ -0.6
HLCS-201ENST00000336648 EFNB2P52799 333 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 ZAR1Q86SH2 424 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 TIMP4Q99727 224 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 MRPL32Q9BYC8 188 aaKnown RBP11.31□□□□□ -0.6
HLCS-201ENST00000336648 MFAP4P55083 255 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 C3AR1Q16581 482 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 WFDC3Q8IUB2 231 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 DDB2Q92466 427 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 AQP10Q96PS8 301 aa11.31□□□□□ -0.6
HLCS-201ENST00000336648 HKR1P10072 659 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 CTAG1AP78358 180 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 PSG4Q00888 419 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 HIST1H1AQ02539 215 aaPredicted RBP11.3□□□□□ -0.6
HLCS-201ENST00000336648 GUCA2BQ16661 112 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 PSMG4Q5JS54 123 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 RNFT1Q5M7Z0 435 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 TCF24Q7RTU0 167 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 OR1K1Q8NGR3 316 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 ALKBH7Q9BT30 221 aaPredicted RBP11.3□□□□□ -0.6
HLCS-201ENST00000336648 HYAL3O43820 417 aaPredicted RBP11.3□□□□□ -0.6
HLCS-201ENST00000336648 TAF15Q92804 592 aaKnown RBP eCLIP11.3□□□□□ -0.6
HLCS-201ENST00000336648 GEMIN7Q9H840 131 aaKnown RBP11.3□□□□□ -0.6
HLCS-201ENST00000336648 FER1L6Q2WGJ9 1857 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms