RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 SAMD5Q5TGI4 173 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 GUSBP11Q6P575 273 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 MRPL21Q7Z2W9 205 aaKnown RBP6.69□□□□□ -1.34
VMA21-201ENST00000330374 ZNF808Q8N4W9 903 aaPredicted RBP6.69□□□□□ -1.34
VMA21-201ENST00000330374 FADS6Q8N9I5 356 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 WDR61Q9GZS3 305 aaKnown RBP6.69□□□□□ -1.34
VMA21-201ENST00000330374 DCAF16Q9NXF7 216 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 PAM16Q9Y3D7 125 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 WDFY4Q6ZS81 3184 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 IGKV1-5P01602 117 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 CNN1P51911 297 aaKnown RBP6.69□□□□□ -1.34
VMA21-201ENST00000330374 ZNF816Q0VGE8 651 aaPredicted RBP6.69□□□□□ -1.34
VMA21-201ENST00000330374 LRRC75BQ2VPJ9 315 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 TDRG1Q3Y452 100 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 LBHQ53QV2 105 aaPredicted RBP6.69□□□□□ -1.34
VMA21-201ENST00000330374 FFAR4Q5NUL3 377 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 ASCL4Q6XD76 172 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 OR10G4Q8NGN3 311 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 OR10G9Q8NGN4 311 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 OR10G7Q8NGN6 311 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 MBD3L1Q8WWY6 194 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 DERL1Q9BUN8 251 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 TPPP3Q9BW30 176 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 FGF23Q9GZV9 251 aaPredicted RBP6.69□□□□□ -1.34
VMA21-201ENST00000330374 ZMAT4Q9H898 229 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 SIRPB1O00241 398 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 NPSP0C0P6 89 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 LIFP15018 202 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 MPLP40238 635 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 FAM53AQ6NSI3 398 aaPredicted RBP6.69□□□□□ -1.34
VMA21-201ENST00000330374 MCEMP1Q8IX19 187 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 TMEM170AQ8WVE7 144 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 RBM14Q96PK6 669 aaKnown RBP6.69□□□□□ -1.34
VMA21-201ENST00000330374 IMMP2LQ96T52 175 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 OR2W1Q9Y3N9 320 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 CACNA1EQ15878 2313 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 MED12LQ86YW9 2145 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 PRR14LQ5THK1 2151 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 LOC102725191A0A1B0GVB3 256 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 NGFP01138 241 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 BPIFB3P59826 476 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 TGFBR3Q03167 851 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 TFF3Q07654 80 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 SPATA46Q5T0L3 261 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 TMEM42Q69YG0 159 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 RABEPKQ7Z6M1 372 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 RNASEH2CQ8TDP1 164 aaKnown RBP6.69□□□□□ -1.34
VMA21-201ENST00000330374 ZNF552Q9H707 407 aaPredicted RBP6.69□□□□□ -1.34
VMA21-201ENST00000330374 C19orf25Q9UFG5 118 aaPredicted RBP6.69□□□□□ -1.34
VMA21-201ENST00000330374 IGLV3-32A0A0A0MS00 114 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 OR6C6A6NF89 314 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 TMPRSS2O15393 492 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 NAPSAO96009 420 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 FAM216AQ8WUB2 273 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 P2RX4Q99571 388 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 OCIAD1Q9NX40 245 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 SEMA5BQ9P283 1151 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 NAGKQ9UJ70 344 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 COL5A1P20908 1838 aaPredicted RBP6.68□□□□□ -1.34
VMA21-201ENST00000330374 C1QTNF9P0C862 333 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 IL3RAP26951 378 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 TFPI2P48307 235 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 THBS3P49746 956 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 GCSAMLQ5JQS6 135 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 DNLZQ5SXM8 178 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 PCSK4Q6UW60 755 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 DBX2Q6ZNG2 339 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 OR5P3Q8WZ94 311 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 OR6C3Q9NZP0 311 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 CER1O95813 267 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 BTF3P20290 206 aaKnown RBP6.68□□□□□ -1.34
VMA21-201ENST00000330374 G6PCP35575 357 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 FOXG1P55316 489 aaPredicted RBP6.68□□□□□ -1.34
VMA21-201ENST00000330374 DSCR4P56555 118 aaPredicted RBP6.68□□□□□ -1.34
VMA21-201ENST00000330374 ERVFC1-1P60608 527 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 BEND2Q8NDZ0 799 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 ABHD14BQ96IU4 210 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 LRFN3Q9BTN0 628 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 PARD6AQ9NPB6 346 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 MAP1BP46821 2468 aaKnown RBP6.68□□□□□ -1.34
VMA21-201ENST00000330374 C11orf94C9JXX5 98 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 RFPL3SP0C7P2 107 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 CLDN15P56746 228 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 FGF12P61328 243 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 CCL7P80098 99 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 ABLIM2Q6H8Q1 611 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 FAM103A1Q9BTL3 118 aaKnown RBP6.68□□□□□ -1.34
VMA21-201ENST00000330374 IL36GQ9NZH8 169 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 TRAPPC2LQ9UL33 140 aa6.68□□□□□ -1.34
VMA21-201ENST00000330374 TRAV38-1A0A0B4J264 116 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 SPINK4O60575 86 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 RHBDL1O75783 438 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 NDUFB4O95168 129 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 IGLV3-19P01714 112 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 COL8A2P25067 703 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 TDGF1P3P51864 188 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 RAB4BP61018 213 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 SERF2P84101 59 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 ACTL10Q5JWF8 245 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 KCNIP4Q6PIL6 250 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms