RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 DUX4L9Q6RFH8 374 aaPredicted RBP13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 ZNF818PQ6ZRF7 136 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 FGFRL1Q8N441 504 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 PRR18Q8N4B5 295 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 ZNF645Q8N7E2 425 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 OR1L1Q8NH94 360 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 CCL13Q99616 98 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 OR2S2Q9NQN1 319 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 CTSZQ9UBR2 303 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 DUX4Q9UBX2 424 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 GAB2Q9UQC2 676 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 LOC105371242A0A075B767 164 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 TRAV20A0A0B4J274 112 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 IGKV1D-13A0A0B4J2D9 117 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 KBTBD11-OT1A0A1B0GTJ5 212 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 TMPRSS2O15393 492 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 PGLYRP1O75594 196 aaPredicted RBP13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 FAM157CP0CG43 387 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 IGKV1-13P0DP09 117 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 RPA2P15927 270 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 F2RP25116 425 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 UCP1P25874 307 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 RAB7AP51149 207 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 PAX2Q02962 417 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 TBC1D26Q86UD7 250 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 GLYATL2Q8WU03 294 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 GAL3ST2Q9H3Q3 398 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 CCL28Q9NRJ3 127 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 OR1A1Q9P1Q5 309 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 SLC25A10Q9UBX3 287 aaPredicted RBP13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 CLN8Q9UBY8 286 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 STAB1Q9NY15 2570 aa13.49□□□□□ -0.25
PDLIM1-201ENST00000329399 SIX6O95475 246 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 OR5AC1P0C628 307 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 NKX2-5P52952 324 aaPredicted RBP13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 KRTAP21-3Q3LHN1 58 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 DCAF12L2Q5VW00 463 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 ZBTB8BQ8NAP8 495 aaPredicted RBP13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 MDFIQ99750 246 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 SPIN2AQ99865 258 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 SPIN2BQ9BPZ2 258 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 SLA2Q9H6Q3 261 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 LIN7CQ9NUP9 197 aaKnown RBP13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 CALYQ9NYX4 217 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 TRBV23-1A0A0A0MS06 115 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 TRAV39A0A0B4J263 110 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 FAM25EA8MYX2 175 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 ATG12O94817 140 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 CDS2O95674 445 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 SRD5A1P18405 259 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 PSMB6P28072 239 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 ZNF66Q6ZN08 573 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 C9orf62Q8N4C0 152 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 THAP6Q8TBB0 222 aa13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 POLR3KQ9Y2Y1 108 aaPredicted RBP13.48□□□□□ -0.25
PDLIM1-201ENST00000329399 C13orf42A0A1B0GVH6 325 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 G3V3Q6 166 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 HSD17B6O14756 317 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 ADAM20O43506 726 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 OR8U9P0C7N5 309 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 CATR1Q13166 79 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 MORN2Q502X0 79 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 C11orf87Q6NUJ2 197 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 ZNF695Q8IW36 515 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 OR8U1Q8NH10 309 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 PPP1R1CQ8WVI7 109 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 HSD17B10Q99714 261 aaKnown RBP13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 GNG12Q9UBI6 72 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 MIOXQ9UGB7 285 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 HSPB11Q9Y547 144 aa13.47□□□□□ -0.25
PDLIM1-201ENST00000329399 A0A1W2PPH5 198 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 A8MXK9 166 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 C22orf46C9J442 243 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 SMLR1H3BR10 107 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 FOXH1O75593 365 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 SERPINE2P07093 398 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 SLC25A6P12236 298 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 NDUFB7P17568 137 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 SSTR5P35346 364 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 RPL31P62899 125 aaKnown RBP13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 WDR25Q64LD2 544 aaPredicted RBP13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 FAM216BQ8N7L0 139 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 TPRX1Q8N7U7 411 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 OR11H4Q8NGC9 324 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 OR52L2PQ8NGH6 319 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 CD300LFQ8TDQ1 290 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 RBPMSQ93062 196 aaKnown RBP13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 NEIL1Q96FI4 390 aaPredicted RBP13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 ABHD14BQ96IU4 210 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 SSBP3Q9BWW4 388 aaPredicted RBP13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 C7orf69Q9H7B7 122 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 GFOD1Q9NXC2 390 aa13.46□□□□□ -0.25
PDLIM1-201ENST00000329399 A0A0D9SG52 128 aa13.45□□□□□ -0.26
PDLIM1-201ENST00000329399 RGS13O14921 159 aa13.45□□□□□ -0.26
PDLIM1-201ENST00000329399 RLN2P04090 185 aa13.45□□□□□ -0.26
PDLIM1-201ENST00000329399 HOXB5P09067 269 aa13.45□□□□□ -0.26
PDLIM1-201ENST00000329399 SELLP14151 372 aa13.45□□□□□ -0.26
PDLIM1-201ENST00000329399 VDAC1P21796 283 aa13.45□□□□□ -0.26
PDLIM1-201ENST00000329399 LOXL3P58215 753 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms