RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 MS4A7Q9GZW8 240 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-201ENST00000322507 ADAMTS7Q9UKP4 1686 aa8.54□□□□□ -1.04
COL12A1-201ENST00000322507 H3BUT2 72 aa8.54□□□□□ -1.04
COL12A1-201ENST00000322507 PAX2Q02962 417 aa8.54□□□□□ -1.04
COL12A1-201ENST00000322507 SMAD2Q15796 467 aaKnown RBP8.54□□□□□ -1.04
COL12A1-201ENST00000322507 VAX1Q5SQQ9 334 aa8.54□□□□□ -1.04
COL12A1-201ENST00000322507 FNDC4Q9H6D8 234 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-201ENST00000322507 A0A1W2PQD3 144 aa8.54□□□□□ -1.04
COL12A1-201ENST00000322507 FZD5Q13467 585 aa8.54□□□□□ -1.04
COL12A1-201ENST00000322507 ASB1Q9Y576 335 aa8.54□□□□□ -1.04
COL12A1-201ENST00000322507 TRGV5A0A0B4J1U4 118 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 C17orf47Q8NEP4 570 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 ZNF250P15622 560 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 SRD5A2P31213 254 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 LINC00303Q3SY05 128 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 OCIAD2Q56VL3 154 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 SPNS2Q8IVW8 549 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 ABHD14BQ96IU4 210 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 WNT5BQ9H1J7 359 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 SFT2D2O95562 160 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 HSPE1P61604 102 aaKnown RBP8.53□□□□□ -1.04
COL12A1-201ENST00000322507 OR2Z1Q8NG97 314 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 C1QTNF6Q9BXI9 259 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 CTSDP07339 412 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-201ENST00000322507 GUCA2BQ16661 112 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 OR9G4Q8NGQ1 327 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 NPFFR1Q9GZQ6 430 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 LRRK1Q38SD2 2015 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 UBE2L6O14933 153 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 CKS2P33552 79 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 LGALS7P47929 136 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 ACER2Q5QJU3 275 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 ZDHHC16Q969W1 377 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 TMEM45BQ96B21 275 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 A0A1B0GU03 582 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 UBE2CO00762 179 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 TMEM255AQ5JRV8 349 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 LAMTOR1Q6IAA8 161 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 THSD4Q6ZMP0 1018 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 GAGE5Q13069 117 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 GAGE6Q13070 117 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 CYB561D1Q8N8Q1 229 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 C3orf85A0A1B0GTC6 90 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 SDCBPO00560 298 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-201ENST00000322507 RAC3P60763 192 aa8.53□□□□□ -1.04
COL12A1-201ENST00000322507 MED13Q9UHV7 2174 aa8.52□□□□□ -1.04
COL12A1-201ENST00000322507 GAGE12JA6NER3 117 aa8.52□□□□□ -1.04
COL12A1-201ENST00000322507 GAGE7O76087 117 aa8.52□□□□□ -1.04
COL12A1-201ENST00000322507 CEACAM5P06731 702 aa8.52□□□□□ -1.04
COL12A1-201ENST00000322507 IFI6P09912 130 aa8.52□□□□□ -1.04
COL12A1-201ENST00000322507 GAGE12FP0CL80 117 aa8.52□□□□□ -1.04
COL12A1-201ENST00000322507 GAGE12GP0CL81 117 aa8.52□□□□□ -1.04
COL12A1-201ENST00000322507 GAGE12IP0CL82 117 aa8.52□□□□□ -1.04
COL12A1-201ENST00000322507 GAGE4Q13068 117 aa8.52□□□□□ -1.04
COL12A1-201ENST00000322507 PRDX2P32119 198 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 FGF8P55075 233 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-201ENST00000322507 MRPL20Q9BYC9 149 aaKnown RBP8.52□□□□□ -1.05
COL12A1-201ENST00000322507 MED29Q9NX70 200 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 A0A0U1RQS6 177 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 NRG2O14511 850 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-201ENST00000322507 CST7O76096 145 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 HOXA4Q00056 320 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-201ENST00000322507 BCDIN3DQ7Z5W3 292 aaKnown RBP8.52□□□□□ -1.05
COL12A1-201ENST00000322507 MS4A5Q9H3V2 200 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 MPDU1O75352 247 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 ABHD3Q8WU67 409 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 CRYBB2P43320 205 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 SLC25A42Q86VD7 318 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 CNRIP1Q96F85 164 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-201ENST00000322507 LHX2P50458 406 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 CEACAM16Q2WEN9 425 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 KIRREL2Q6UWL6 708 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 MUC20Q8N307 709 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-201ENST00000322507 ZNF831Q5JPB2 1677 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 A0A087WWC5 75 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 C21orf140B9A014 251 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 ZFPL1O95159 310 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 PXNP49023 591 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-201ENST00000322507 TMEM215Q68D42 235 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 LINC00470Q9BZP3 86 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 SHANK3Q9BYB0 1731 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 FCGR2BP31994 310 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-201ENST00000322507 TMEM30BQ3MIR4 351 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 CCDC144NLQ6NUI1 221 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 WFDC8Q8IUA0 241 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 ODAMA1E959 279 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 CDC42EP2O14613 210 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 MLNRO43193 412 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 PRKNO60260 465 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-201ENST00000322507 PAGE4O60829 102 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 C6orf106Q9H6K1 298 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-201ENST00000322507 KLK11Q9UBX7 282 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 PRNDQ9UKY0 176 aa8.52□□□□□ -1.05
COL12A1-201ENST00000322507 GAGE12BA1L429 117 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 HOXA3O43365 443 aaPredicted RBP8.51□□□□□ -1.05
COL12A1-201ENST00000322507 MVDP53602 400 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 PCBP3P57721 371 aaKnown RBP8.51□□□□□ -1.05
COL12A1-201ENST00000322507 NBASA2RRP1 2371 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 C1QTNF9P0C862 333 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms