RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PARD6GQ9BYG4 376 aaPredicted RBP6.47□□□□□ -1.37
CDHR3-201ENST00000317716 OR2J1Q9GZK6 312 aa6.47□□□□□ -1.37
CDHR3-201ENST00000317716 OR1A1Q9P1Q5 309 aa6.47□□□□□ -1.37
CDHR3-201ENST00000317716 PSG11Q9UQ72 335 aa6.47□□□□□ -1.37
CDHR3-201ENST00000317716 A0A1B0GU03 582 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 GJE1A6NN92 205 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 M0QZK8 103 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 BMPR1BO00238 502 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 SNAI2O43623 268 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 TSPAN2O60636 221 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 GGCTO75223 188 aaKnown RBP6.46□□□□□ -1.37
CDHR3-201ENST00000317716 CTXN2P0C2S0 81 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 PRB4P10163 310 aaPredicted RBP6.46□□□□□ -1.37
CDHR3-201ENST00000317716 F2RP25116 425 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 HOXA6P31267 233 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 UQCRFS1P47985 274 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 CLDN15P56746 228 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 OR2V1Q8NHB1 315 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 MRGPRDQ8TDS7 321 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 TAF15Q92804 592 aaKnown RBP eCLIP6.46□□□□□ -1.37
CDHR3-201ENST00000317716 ADIPOR1Q96A54 375 aa6.46□□□□□ -1.37
CDHR3-201ENST00000317716 WDR61Q9GZS3 305 aaKnown RBP6.46□□□□□ -1.37
CDHR3-201ENST00000317716 LOC390937A0A1W2PQ73 354 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 RNF212BA8MTL3 300 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 TRAF3IP2O43734 574 aaPredicted RBP6.46□□□□□ -1.38
CDHR3-201ENST00000317716 SYNGR1O43759 233 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 OR10J4P0C629 311 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 PLA2G5P39877 138 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 ATP5G3P48201 142 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 CCR5P51681 352 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 RPL23P62829 140 aaKnown RBP6.46□□□□□ -1.38
CDHR3-201ENST00000317716 GNB2P62879 340 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 TRA2AQ13595 282 aaKnown RBP eCLIP6.46□□□□□ -1.38
CDHR3-201ENST00000317716 LRRK1Q38SD2 2015 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 Q6ZVH6 145 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 C1QL4Q86Z23 238 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 OR4P4Q8NGL7 312 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 MVB12AQ96EY5 273 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 MRPL18Q9H0U6 180 aaKnown RBP6.46□□□□□ -1.38
CDHR3-201ENST00000317716 A8MWP6 167 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 M0R2Z0 102 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 SELEP16581 610 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 CD81P60033 236 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 FOXC1Q12948 553 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 SLC25A45Q8N413 288 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 TCTEX1D1Q8N7M0 179 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 ABHD3Q8WU67 409 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 FAM131CQ96AQ9 280 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 DAZAP1Q96EP5 407 aaKnown RBP6.46□□□□□ -1.38
CDHR3-201ENST00000317716 ACY3Q96HD9 319 aa6.46□□□□□ -1.38
CDHR3-201ENST00000317716 CADP27708 2225 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 CTXND1A0A1B0GTU2 59 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 DLEU1O43261 78 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 PPIHO43447 177 aaKnown RBP6.45□□□□□ -1.38
CDHR3-201ENST00000317716 PGLYRP1O75594 196 aaPredicted RBP6.45□□□□□ -1.38
CDHR3-201ENST00000317716 SERF1AO75920 110 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 KBTBD11O94819 623 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 CCL4P13236 92 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 TMEM11P17152 192 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 FCER1GP30273 86 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 CEBPDP49716 269 aaPredicted RBP6.45□□□□□ -1.38
CDHR3-201ENST00000317716 ZNF137PP52743 207 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 SUCLG1P53597 346 aaKnown RBP6.45□□□□□ -1.38
CDHR3-201ENST00000317716 RBM11P57052 281 aaKnown RBP6.45□□□□□ -1.38
CDHR3-201ENST00000317716 NXPH1P58417 271 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 RPL24P83731 157 aaKnown RBP6.45□□□□□ -1.38
CDHR3-201ENST00000317716 C3AR1Q16581 482 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 C10orf91Q5T1B1 145 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 STUMQ69YW2 141 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 OR4A47Q6IF82 309 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 DIRC2Q96SL1 478 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 SMDT1Q9H4I9 107 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 SLC22A20A6NK97 555 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 IFITM10A6NMD0 228 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 RRP8O43159 456 aaKnown RBP6.45□□□□□ -1.38
CDHR3-201ENST00000317716 USF1P22415 310 aaPredicted RBP6.45□□□□□ -1.38
CDHR3-201ENST00000317716 GNG4P50150 75 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 GTF3C1Q12789 2109 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 RAB35Q15286 201 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 PRSS8Q16651 343 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 HIST3H3Q16695 136 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 GCSAMLQ5JQS6 135 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 Q5PR19 223 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 LEMD1Q68G75 181 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 UNQ5815/PRO19632Q6UWF5 114 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 LHFPL1Q86WI0 220 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 RNF166Q96A37 237 aaPredicted RBP6.45□□□□□ -1.38
CDHR3-201ENST00000317716 RASL10BQ96S79 203 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 C2orf88Q9BSF0 95 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 TMEM147Q9BVK8 224 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 SSBP3Q9BWW4 388 aaPredicted RBP6.45□□□□□ -1.38
CDHR3-201ENST00000317716 NOTCH3Q9UM47 2321 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 IGHV1OR21-1A0A087WYE8 117 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 M0R1X1 148 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 GFRA3O60609 400 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 ZG16O60844 167 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 NAPSAO96009 420 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 NGFP01138 241 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 CCL3P10147 92 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 IL3RAP26951 378 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms