RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 PCBD1P61457 104 aa13.23□□□□□ -0.29
UBAP1-201ENST00000297661 TRA2AQ13595 282 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBAP1-201ENST00000297661 CENPVQ7Z7K6 275 aaPredicted RBP13.23□□□□□ -0.29
UBAP1-201ENST00000297661 MGAQ8IWI9 3026 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 DNPH1O43598 174 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 LILRA1O75019 489 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 GFRA1P56159 465 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 OR5I1Q13606 314 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 OR2T10Q8NGZ9 312 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 PLPPR1Q8TBJ4 325 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 OR51I2Q9H344 312 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 LOXL2Q9Y4K0 774 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 IGHV3-64DA0A0J9YX35 117 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 A0A1B0GUS0 222 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 SYNGR1O43759 233 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 KBTBD11O94819 623 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 TNFSF10P50591 281 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 TMEM267Q0VDI3 215 aaPredicted RBP13.22□□□□□ -0.29
UBAP1-201ENST00000297661 DCAF12Q5T6F0 453 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 TMEM256Q8N2U0 113 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 PSMF1Q92530 271 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 AGMATQ9BSE5 352 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 C1QTNF5Q9BXJ0 243 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 ZNF552Q9H707 407 aaPredicted RBP13.22□□□□□ -0.29
UBAP1-201ENST00000297661 MTCH1Q9NZJ7 389 aa13.22□□□□□ -0.29
UBAP1-201ENST00000297661 MED13Q9UHV7 2174 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 TRAV39A0A0B4J263 110 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 IFNA1P01562 189 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 IZUMO4Q1ZYL8 232 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 NMSQ5H8A3 153 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 TMEM211Q6ICI0 200 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 SCGB1C1Q8TD33 95 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 CCL28Q9NRJ3 127 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 RNF115Q9Y4L5 304 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 COL27A1Q8IZC6 1860 aaPredicted RBP13.21□□□□□ -0.29
UBAP1-201ENST00000297661 HS3ST1O14792 307 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 SIAH2O43255 324 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 TCF21O43680 179 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 ZNF737O75373 536 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 RIPPLY2Q5TAB7 128 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 CISD2Q8N5K1 135 aaKnown RBP13.21□□□□□ -0.29
UBAP1-201ENST00000297661 UBALD1Q8TB05 177 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 MIEN1Q9BRT3 115 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 IL36GQ9NZH8 169 aa13.21□□□□□ -0.29
UBAP1-201ENST00000297661 CACNA1AO00555 2505 aa13.21□□□□□ -0.3
UBAP1-201ENST00000297661 MAP1LC3B2A6NCE7 125 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 NUPR1O60356 82 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 IL6RP08887 468 aaPredicted RBP13.2□□□□□ -0.3
UBAP1-201ENST00000297661 CD33P20138 364 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 TDRG1Q3Y452 100 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 C20orf204Q6ZNR8 217 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 LINC00696Q6ZRV3 163 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 MRPL21Q7Z2W9 205 aaKnown RBP13.2□□□□□ -0.3
UBAP1-201ENST00000297661 MYPOPQ86VE0 399 aaPredicted RBP13.2□□□□□ -0.3
UBAP1-201ENST00000297661 ZCCHC14Q8WYQ9 949 aaKnown RBP13.2□□□□□ -0.3
UBAP1-201ENST00000297661 RDH5Q92781 318 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 SCNM1Q9BWG6 230 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 OR2J1Q9GZK6 312 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 MAP1LC3BQ9GZQ8 125 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 DIDO1Q9BTC0 2240 aaKnown RBP13.2□□□□□ -0.3
UBAP1-201ENST00000297661 IGKV1-6A0A0C4DH72 117 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 VDAC1P21796 283 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 CD82P27701 267 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 MDH2P40926 338 aaKnown RBP13.2□□□□□ -0.3
UBAP1-201ENST00000297661 MAGEA5P43359 124 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 MEF2BQ02080 365 aaPredicted RBP13.2□□□□□ -0.3
UBAP1-201ENST00000297661 CST9LP1Q5W188 147 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 C6orf15Q6UXA7 325 aaPredicted RBP13.2□□□□□ -0.3
UBAP1-201ENST00000297661 TOMM20LQ6UXN7 152 aa13.2□□□□□ -0.3
UBAP1-201ENST00000297661 CLEC18AA5D8T8 446 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 TYMSP04818 313 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 CLEC18CQ8NCF0 446 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 IL22RA2Q969J5 263 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 SLC22A20A6NK97 555 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 TFPI2P48307 235 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 SPATA46Q5T0L3 261 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 C20orf144Q9BQM9 153 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 TAAR3PQ9P1P4 343 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 RNF150Q9ULK6 438 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 SPSB4Q96A44 273 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 REPIN1Q9BWE0 567 aaKnown RBP13.19□□□□□ -0.3
UBAP1-201ENST00000297661 PRDM14Q9GZV8 571 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 PARLQ9H300 379 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 PLK3Q9H4B4 646 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 DNAJC4Q9NNZ3 241 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 ZNF391Q9UJN7 358 aa13.19□□□□□ -0.3
UBAP1-201ENST00000297661 ESPL1Q14674 2120 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 SPENQ96T58 3664 aaKnown RBP13.18□□□□□ -0.3
UBAP1-201ENST00000297661 TNFSF13O75888 250 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 NEURL1O76050 574 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 SERPINA7P05543 415 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 COTL1Q14019 142 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 ZDHHC23Q8IYP9 409 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 ZNF295-AS1Q8N0V1 137 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 OR51H1Q8NH63 302 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 IL1F10Q8WWZ1 152 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 LHX4Q969G2 390 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 ANAPC16Q96DE5 110 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 C12orf49Q9H741 205 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 BOD1L1Q8NFC6 3051 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms