RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 PHYHD1Q5SRE7 291 aa8.68□□□□□ -1.02
CLDN1-201ENST00000295522 CRIP3Q6Q6R5 217 aa8.68□□□□□ -1.02
CLDN1-201ENST00000295522 HAPLN4Q86UW8 402 aa8.68□□□□□ -1.02
CLDN1-201ENST00000295522 APOBEC3DQ96AK3 386 aaPredicted RBP8.68□□□□□ -1.02
CLDN1-201ENST00000295522 PSMG3Q9BT73 122 aaPredicted RBP8.68□□□□□ -1.02
CLDN1-201ENST00000295522 CST9LQ9H4G1 147 aa8.68□□□□□ -1.02
CLDN1-201ENST00000295522 A0A1W2PRS3 328 aa8.68□□□□□ -1.02
CLDN1-201ENST00000295522 TYMSP04818 313 aa8.68□□□□□ -1.02
CLDN1-201ENST00000295522 FBLP22087 321 aaKnown RBP8.68□□□□□ -1.02
CLDN1-201ENST00000295522 NPPCP23582 126 aa8.68□□□□□ -1.02
CLDN1-201ENST00000295522 NTSR1P30989 418 aa8.68□□□□□ -1.02
CLDN1-201ENST00000295522 ZNF816Q0VGE8 651 aaPredicted RBP8.68□□□□□ -1.02
CLDN1-201ENST00000295522 ZP4Q12836 540 aa8.68□□□□□ -1.02
CLDN1-201ENST00000295522 FXYD3Q14802 87 aa8.68□□□□□ -1.02
CLDN1-201ENST00000295522 OCIAD2Q56VL3 154 aa8.68□□□□□ -1.02
CLDN1-201ENST00000295522 MRPL52Q86TS9 123 aaKnown RBP8.68□□□□□ -1.02
CLDN1-201ENST00000295522 SPSB1Q96BD6 273 aa8.68□□□□□ -1.02
CLDN1-201ENST00000295522 AGMATQ9BSE5 352 aa8.68□□□□□ -1.02
CLDN1-201ENST00000295522 MRPL13Q9BYD1 178 aaKnown RBP8.68□□□□□ -1.02
CLDN1-201ENST00000295522 GOSR1O95249 250 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 SRIP30626 198 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 GCNT2Q8N0V5 402 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 IFI44Q8TCB0 444 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 ST8SIA1Q92185 356 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 MEGF9Q9H1U4 602 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 GCM1Q9NP62 436 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 PLSCR2Q9NRY7 297 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 TP53TG3Q9ULZ0 132 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 HSBP1O75506 76 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 COL9A1P20849 921 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 C9orf135Q5VTT2 229 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 ZNF808Q8N4W9 903 aaPredicted RBP8.67□□□□□ -1.02
CLDN1-201ENST00000295522 OR10P1Q8NGE3 313 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 OR5P3Q8WZ94 311 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 ZNF837Q96EG3 531 aaPredicted RBP8.67□□□□□ -1.02
CLDN1-201ENST00000295522 IL19Q9UHD0 177 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 IGHV2OR16-5A0A0B4J2B6 119 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 KIR2DS5A0A0G2JLQ3 304 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 A0A0G2JNG1 304 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 FAM166BA8MTA8 275 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 TMEM238C9JI98 176 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 KIR2DS3K7RE56 304 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 EFNA2O43921 213 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 IGHV3-9P01782 118 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 IGKV3-11P04433 115 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 IFI6P09912 130 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 C3orf79P0CE67 100 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 B4GALT1P15291 398 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 CCL1P22362 96 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 RBM11P57052 281 aaKnown RBP8.67□□□□□ -1.02
CLDN1-201ENST00000295522 KIR2DS5Q14953 304 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 PLPPR5Q32ZL2 321 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 AMMECR1LQ6DCA0 310 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 Q6ZPA2 131 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 LHFPL2Q6ZUX7 228 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 RCHY1Q96PM5 261 aa8.67□□□□□ -1.02
CLDN1-201ENST00000295522 TRIOO75962 3097 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 LAMA1P25391 3075 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 SCO2A0A1W2PP80 73 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 GPX1P07203 203 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 FUT6P51993 359 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 PSG4Q00888 419 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 SLC25A47Q6Q0C1 308 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 MRGPRDQ8TDS7 321 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 KLHDC7BQ96G42 594 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 USF3Q68DE3 2245 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 A0A1W2PQD3 144 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 OR2T8A6NH00 312 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 H0Y980 276 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 K7ERU9 68 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 VENTXO95231 258 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 BCL3P20749 454 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 GFRA1P56159 465 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 MPV17L2Q567V2 206 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 RAET1LQ5VY80 246 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 TMEM211Q6ICI0 200 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 OCC1Q8TAD7 63 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 ZNF488Q96MN9 340 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 DOCK7Q96N67 2140 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 LRP5LA4QPB2 252 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 NUDT3O95989 172 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 EN2P19622 333 aaPredicted RBP8.66□□□□□ -1.02
CLDN1-201ENST00000295522 DRD1P21728 446 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 LHX2P50458 406 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 GPM6AP51674 278 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 RNASEKQ6P5S7 137 aaKnown RBP8.66□□□□□ -1.02
CLDN1-201ENST00000295522 SSC4DQ8WTU2 575 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 UCN2Q96RP3 112 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 R4GN57 208 aa8.66□□□□□ -1.02
CLDN1-201ENST00000295522 A0A0U1RQV5 110 aa8.65□□□□□ -1.02
CLDN1-201ENST00000295522 KIR2DS1A0A191URI9 304 aa8.65□□□□□ -1.02
CLDN1-201ENST00000295522 YPEL1O60688 119 aa8.65□□□□□ -1.02
CLDN1-201ENST00000295522 WNT2P09544 360 aa8.65□□□□□ -1.02
CLDN1-201ENST00000295522 KIR2DS4P43632 304 aa8.65□□□□□ -1.02
CLDN1-201ENST00000295522 LINC00310P59036 64 aa8.65□□□□□ -1.02
CLDN1-201ENST00000295522 KIR2DS1Q14954 304 aa8.65□□□□□ -1.02
CLDN1-201ENST00000295522 ASPHD1Q5U4P2 390 aa8.65□□□□□ -1.02
CLDN1-201ENST00000295522 ABHD14BQ96IU4 210 aa8.65□□□□□ -1.02
CLDN1-201ENST00000295522 OXGR1Q96P68 337 aa8.65□□□□□ -1.02
CLDN1-201ENST00000295522 YPEL2Q96QA6 119 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms