RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PCP4P48539 62 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 CADM4Q8NFZ8 388 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 OR2K2Q8NGT1 345 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 NKX2-8O15522 239 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 CFDP00746 253 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-201ENST00000282516 MMP16P51512 607 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 C17orf47Q8NEP4 570 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 WIPI2Q9Y4P8 454 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 PSMB11A5LHX3 300 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 EPHA8P29322 1005 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-201ENST00000282516 CLEC2AQ6UVW9 174 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 NEUROG1Q92886 237 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 SMOC1Q9H4F8 434 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 SF3B6Q9Y3B4 125 aaKnown RBP7.62□□□□□ -1.19
NIPBL-201ENST00000282516 PATJQ8NI35 1801 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 IGHV3OR16-12A0A075B7B8 117 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 IFNL4K9M1U5 179 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 HKR1P10072 659 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 DUX5Q96PT3 197 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 MRPL18Q9H0U6 180 aaKnown RBP7.62□□□□□ -1.19
NIPBL-201ENST00000282516 NTMQ9P121 344 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 IGKV3OR2-268A0A0C4DH90 116 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 MOSPD3O75425 235 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 IGLV3-27P01718 113 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 RPL8P62917 257 aaKnown RBP7.62□□□□□ -1.19
NIPBL-201ENST00000282516 CCL28Q9NRJ3 127 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 LINC00869P0C866 280 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 PF4V1P10720 104 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 SOX8P57073 446 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 OVCH2Q7RTZ1 564 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 TMEM171Q8WVE6 324 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 MRM2Q9UI43 246 aaKnown RBP7.62□□□□□ -1.19
NIPBL-201ENST00000282516 TRAV30A0A087WSZ9 112 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 CDIPTO14735 213 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 STARD6P59095 220 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 Q6ZNB5 142 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 NEU1Q99519 415 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 LINC00862A6NCI5 91 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 TFPI2P48307 235 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 MBNL2Q5VZF2 373 aaKnown RBP7.62□□□□□ -1.19
NIPBL-201ENST00000282516 FAM216AQ8WUB2 273 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 MRPL24Q96A35 216 aaKnown RBP7.62□□□□□ -1.19
NIPBL-201ENST00000282516 MS4A5Q9H3V2 200 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 ARFGEF1Q9Y6D6 1849 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 DDX60LQ5H9U9 1706 aaKnown RBP7.62□□□□□ -1.19
NIPBL-201ENST00000282516 RBBP6Q7Z6E9 1792 aaKnown RBP7.62□□□□□ -1.19
NIPBL-201ENST00000282516 IGHV3OR15-7A0A075B7D8 119 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 FXYD1O00168 92 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 SOD3P08294 240 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 PHF3Q92576 2039 aaKnown RBP7.62□□□□□ -1.19
NIPBL-201ENST00000282516 FTH1P19P0C7X4 201 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 TMEM95Q3KNT9 176 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 INO80CQ6PI98 192 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-201ENST00000282516 PGLYRP3Q96LB9 341 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 PRSS27Q9BQR3 290 aa7.62□□□□□ -1.19
NIPBL-201ENST00000282516 LIPT2A6NK58 231 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 SCN7AQ01118 1682 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 IGKV3D-15A0A087WSY6 115 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 RPL36A-HNRNPH2H7BZ11 118 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 TSPAN2O60636 221 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 IGKV3-15P01624 115 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 NUTF2P61970 127 aaKnown RBP7.61□□□□□ -1.19
NIPBL-201ENST00000282516 KLK15Q9H2R5 256 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 TGIF2-C20orf24A0A0A6YYL0 155 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 TRBV7-9A0A0J9YWB2 115 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 CNTFRP26992 372 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 RPL27AP46776 148 aaKnown RBP7.61□□□□□ -1.19
NIPBL-201ENST00000282516 APOBEC4Q8WW27 367 aaKnown RBP7.61□□□□□ -1.19
NIPBL-201ENST00000282516 TUBD1Q9UJT1 453 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 KCNE1BA0A087WTH5 132 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 HSPB1P04792 205 aaKnown RBP7.61□□□□□ -1.19
NIPBL-201ENST00000282516 PRICKLE4Q2TBC4 344 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 PSMG4Q5JS54 123 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 LYZL2Q7Z4W2 148 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 SPNS2Q8IVW8 549 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 SHISA5Q8N114 240 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 MARS2Q96GW9 593 aaKnown RBP7.61□□□□□ -1.19
NIPBL-201ENST00000282516 PCGF1Q9BSM1 259 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 TREM2Q9NZC2 230 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 TINAGQ9UJW2 476 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 GDF9O60383 454 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 NDUFB4O95168 129 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 GCSAMQ8N6F7 178 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 IGHV3-21A0A0B4J1V1 117 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 CEACAM4O75871 244 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 SFTPCP11686 197 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 MYOGP15173 224 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 ATP6V0CP27449 155 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 MC5RP33032 325 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 ATP5G2Q06055 141 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 VSTM2LQ96N03 204 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 PIMREGQ9BSJ6 248 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 C19orf24Q9BVV8 132 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 QTRT1Q9BXR0 403 aaKnown RBP7.61□□□□□ -1.19
NIPBL-201ENST00000282516 hCG_38984A0A1B0GV85 526 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 C7orf66A4D0T2 115 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 HOXA5P20719 270 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 SRIP30626 198 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 OTX1P32242 354 aaPredicted RBP7.61□□□□□ -1.19
NIPBL-201ENST00000282516 PIGYQ3MUY2 71 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms