RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ZNF837Q96EG3 531 aaPredicted RBP11.99□□□□□ -0.49
CDH3-201ENST00000264012 DOCK4Q8N1I0 1966 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 CDK2AP1O14519 115 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 CYB5R3P00387 301 aaPredicted RBP11.98□□□□□ -0.49
CDH3-201ENST00000264012 PTGDSP41222 190 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 SPCS3P61009 180 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 OR8I2Q8N0Y5 310 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 OR11H4Q8NGC9 324 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 GPR146Q96CH1 333 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 IGHV3-72A0A0B4J1Y9 119 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 CXorf1O96002 111 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 CFDP00746 253 aaPredicted RBP11.98□□□□□ -0.49
CDH3-201ENST00000264012 TNFSF10P50591 281 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 PERPQ96FX8 193 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 MESP1Q9BRJ9 268 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 NPVFQ9HCQ7 196 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 B4DEV8 164 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 NHLRC3Q5JS37 347 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 ASPHD2Q6ICH7 369 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 RSG1Q9BU20 258 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 IGHV3-21A0A0B4J1V1 117 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 GLIPR1P48060 266 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 VWA1Q6PCB0 445 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 DPPA3Q6W0C5 159 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 ZNF788Q6ZQV5 615 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 H1FOOQ8IZA3 346 aaPredicted RBP11.98□□□□□ -0.49
CDH3-201ENST00000264012 STXBP6Q8NFX7 210 aa11.98□□□□□ -0.49
CDH3-201ENST00000264012 PDE6DO43924 150 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 C1QL1O75973 258 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 MC5RP33032 325 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 RPL27AP46776 148 aaKnown RBP11.97□□□□□ -0.49
CDH3-201ENST00000264012 TCL1AP56279 114 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 ZFP36L1Q07352 338 aaKnown RBP11.97□□□□□ -0.49
CDH3-201ENST00000264012 RNASEKQ6P5S7 137 aaKnown RBP11.97□□□□□ -0.49
CDH3-201ENST00000264012 SELENOHQ8IZQ5 122 aaKnown RBP11.97□□□□□ -0.49
CDH3-201ENST00000264012 KLHDC1Q8N7A1 406 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 ANAPC16Q96DE5 110 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 MED12Q93074 2177 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 HTR1DP28221 377 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 FCER1GP30273 86 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 KHDC3LQ587J8 217 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 SMDT1Q9H4I9 107 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 MIOXQ9UGB7 285 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 RNF115Q9Y4L5 304 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 C9orf172C9J069 976 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 NDUFA2O43678 99 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 Q5BKY6 102 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 WDR73Q6P4I2 378 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 CLEC5AQ9NY25 188 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 DNASE2O00115 360 aaPredicted RBP11.97□□□□□ -0.49
CDH3-201ENST00000264012 NPIPB7O75200 414 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 HKR1P10072 659 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 CEACAM1P13688 526 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 FAM74A3Q4VXF1 159 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 MRPL13Q9BYD1 178 aaKnown RBP11.97□□□□□ -0.49
CDH3-201ENST00000264012 HILPDAQ9Y5L2 63 aa11.97□□□□□ -0.49
CDH3-201ENST00000264012 ECSCRQ19T08 205 aa11.96□□□□□ -0.49
CDH3-201ENST00000264012 NRN1LQ496H8 165 aa11.96□□□□□ -0.49
CDH3-201ENST00000264012 POM121Q96HA1 1249 aa11.96□□□□□ -0.49
CDH3-201ENST00000264012 AQP10Q96PS8 301 aa11.96□□□□□ -0.49
CDH3-201ENST00000264012 SIRT7Q9NRC8 400 aa11.96□□□□□ -0.49
CDH3-201ENST00000264012 CACNA1DQ01668 2161 aa11.96□□□□□ -0.49
CDH3-201ENST00000264012 AKAP6Q13023 2319 aa11.96□□□□□ -0.49
CDH3-201ENST00000264012 OR2J3O76001 311 aa11.96□□□□□ -0.49
CDH3-201ENST00000264012 ZNF818PQ6ZRF7 136 aa11.96□□□□□ -0.49
CDH3-201ENST00000264012 OR52M1Q8NGK5 317 aa11.96□□□□□ -0.49
CDH3-201ENST00000264012 RBKSQ9H477 322 aa11.96□□□□□ -0.49
CDH3-201ENST00000264012 IDI2-AS1Q9NZ38 188 aa11.96□□□□□ -0.49
CDH3-201ENST00000264012 TUBD1Q9UJT1 453 aa11.96□□□□□ -0.49
CDH3-201ENST00000264012 A0A1B0GTI1 187 aa11.96□□□□□ -0.5
CDH3-201ENST00000264012 HELTA6NFD8 242 aa11.96□□□□□ -0.5
CDH3-201ENST00000264012 UCP3P55916 312 aa11.96□□□□□ -0.5
CDH3-201ENST00000264012 TOMM20LQ6UXN7 152 aa11.96□□□□□ -0.5
CDH3-201ENST00000264012 SHISA5Q8N114 240 aa11.96□□□□□ -0.5
CDH3-201ENST00000264012 DPF1Q92782 380 aa11.96□□□□□ -0.5
CDH3-201ENST00000264012 SIP14410 1827 aa11.96□□□□□ -0.5
CDH3-201ENST00000264012 RALGAPA1Q6GYQ0 2036 aa11.96□□□□□ -0.5
CDH3-201ENST00000264012 IFNL4K9M1U5 179 aa11.96□□□□□ -0.5
CDH3-201ENST00000264012 MMP7P09237 267 aaPredicted RBP11.96□□□□□ -0.5
CDH3-201ENST00000264012 TIMM23BQ5SRD1 257 aa11.96□□□□□ -0.5
CDH3-201ENST00000264012 FAM222BQ8WU58 562 aa11.96□□□□□ -0.5
CDH3-201ENST00000264012 NRIP2Q9BQI9 281 aa11.96□□□□□ -0.5
CDH3-201ENST00000264012 NAGKQ9UJ70 344 aa11.96□□□□□ -0.5
CDH3-201ENST00000264012 BCL2P10415 239 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 RPL8P62917 257 aaKnown RBP11.95□□□□□ -0.5
CDH3-201ENST00000264012 RSRP1Q9BUV0 290 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 LYRM2Q9NU23 88 aaPredicted RBP11.95□□□□□ -0.5
CDH3-201ENST00000264012 JPT1Q9UK76 154 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 KCNMB2Q9Y691 235 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 SPTBN1Q01082 2364 aaKnown RBP11.95□□□□□ -0.5
CDH3-201ENST00000264012 SRSF10O75494 262 aaKnown RBP11.95□□□□□ -0.5
CDH3-201ENST00000264012 OR2A4O95047 310 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 CECR9P0C854 216 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 MUC1P15941 1255 aaPredicted RBP11.95□□□□□ -0.5
CDH3-201ENST00000264012 WNT5AP41221 380 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 ZNF880Q6PDB4 577 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 OR2A7Q96R45 310 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 WASHC3Q9Y3C0 194 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 MRPS18CQ9Y3D5 142 aaKnown RBP11.95□□□□□ -0.5
CDH3-201ENST00000264012 YTHDF2Q9Y5A9 579 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms