RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 DMRT1Q9Y5R6 373 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 A0A0J9YW62 118 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 LEPROTL1O95214 131 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 LINC00869P0C866 280 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 SRSF3P84103 164 aaKnown RBP10.41□□□□□ -0.74
SMG6-201ENST00000263073 IGKV3D-11A0A0A0MRZ8 115 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 MUC21A0A0G2JKD1 596 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 MUC21A0A140T8X8 626 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 IGKV3-11P04433 115 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 PRDX2P32119 198 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 MUC21Q5SSG8 566 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 ZNF818PQ6ZRF7 136 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 BIVMQ86UB2 503 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 OR10S1Q8NGN2 331 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 C10orf35Q96D05 121 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 HIST1H4GQ99525 98 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 NPVFQ9HCQ7 196 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 GZMHP20718 246 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 FGFRL1Q8N441 504 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 SF3B5Q9BWJ5 86 aaKnown RBP10.4□□□□□ -0.74
SMG6-201ENST00000263073 BEX4Q9NWD9 120 aaPredicted RBP10.4□□□□□ -0.74
SMG6-201ENST00000263073 UQCR10Q9UDW1 63 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 PAPPA2Q9BXP8 1791 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 KIAA1217Q5T5P2 1943 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 A0A0B4J293 547 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 CXorf51AA0A1B0GTR3 108 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 CRYABP02511 175 aaKnown RBP10.4□□□□□ -0.74
SMG6-201ENST00000263073 CKS2P33552 79 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 NPBWR2P48146 333 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 TM4SF20Q53R12 229 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 LAMTOR1Q6IAA8 161 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 P2RX4Q99571 388 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 AMY1AP04745 511 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 LEMD1Q68G75 181 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 OR2Y1Q8NGV0 311 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 AQP10Q96PS8 301 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 UBTD1Q9HAC8 227 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 MCM3APO60318 1980 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 H0Y980 276 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 OR1L8Q8NGR8 309 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 OR2V2Q96R30 315 aa10.4□□□□□ -0.74
SMG6-201ENST00000263073 F2RL2O00254 374 aa10.4□□□□□ -0.75
SMG6-201ENST00000263073 TNFSF14O43557 240 aa10.4□□□□□ -0.75
SMG6-201ENST00000263073 GAPDHP04406 335 aaKnown RBP10.4□□□□□ -0.75
SMG6-201ENST00000263073 TEX30Q5JUR7 227 aa10.4□□□□□ -0.75
SMG6-201ENST00000263073 Q5PR19 223 aa10.4□□□□□ -0.75
SMG6-201ENST00000263073 ABHD12Q8N2K0 398 aa10.4□□□□□ -0.75
SMG6-201ENST00000263073 TMEM265A0A087WTH1 108 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 PRB4P10163 310 aaPredicted RBP10.39□□□□□ -0.75
SMG6-201ENST00000263073 GLULP15104 373 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 SERF2P84101 59 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 TMEM177Q53S58 311 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 OR4B1Q8NGF8 309 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 ZNF764Q96H86 408 aaPredicted RBP10.39□□□□□ -0.75
SMG6-201ENST00000263073 SLC25A10Q9UBX3 287 aaPredicted RBP10.39□□□□□ -0.75
SMG6-201ENST00000263073 WIPI2Q9Y4P8 454 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 DSPPQ9NZW4 1301 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 TGFAP01135 160 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 COX19Q49B96 90 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 DOCK1Q14185 1865 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 A0A0U1RQV5 110 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 SLC17A3O00476 420 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 MOSPD3O75425 235 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 CKAP5Q14008 2032 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 S1PR2O95136 353 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 HOXC4P09017 264 aaPredicted RBP10.39□□□□□ -0.75
SMG6-201ENST00000263073 AREGP15514 252 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 FOXA3P55318 350 aaPredicted RBP10.39□□□□□ -0.75
SMG6-201ENST00000263073 ISXQ2M1V0 245 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 CD200R1LQ6Q8B3 271 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 CALHM1Q8IU99 346 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 LSM10Q969L4 123 aaKnown RBP10.39□□□□□ -0.75
SMG6-201ENST00000263073 OR8B2Q96RD0 313 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 SLC25A33Q9BSK2 321 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 HSPB7Q9UBY9 170 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 TRPM6Q9BX84 2022 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 HYPMO75409 117 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 DANCRP0C864 163 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 ZNF735P0CB33 412 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 CEACAM3P40198 252 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 GLIPR1P48060 266 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 REC114Q7Z4M0 266 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 ZNF645Q8N7E2 425 aa10.39□□□□□ -0.75
SMG6-201ENST00000263073 CISD1Q9NZ45 108 aaKnown RBP10.39□□□□□ -0.75
SMG6-201ENST00000263073 DICER1Q9UPY3 1922 aaKnown RBP10.38□□□□□ -0.75
SMG6-201ENST00000263073 HPRT1P00492 218 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 SLC25A53Q5H9E4 307 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 OPN3Q9H1Y3 402 aaPredicted RBP10.38□□□□□ -0.75
SMG6-201ENST00000263073 LHFPL6Q9Y693 200 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 DXOO77932 396 aaKnown RBP10.38□□□□□ -0.75
SMG6-201ENST00000263073 TBX6O95947 436 aaPredicted RBP10.38□□□□□ -0.75
SMG6-201ENST00000263073 FSTP19883 344 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 CEACAM21Q3KPI0 293 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 ZNF506Q5JVG8 444 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 COL4A1P02462 1669 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 C2orf83Q53S99 150 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 PEAR1Q5VY43 1037 aaPredicted RBP10.38□□□□□ -0.75
SMG6-201ENST00000263073 GUCD1Q96NT3 240 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 ARFGEF1Q9Y6D6 1849 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 IGLV1-36A0A0B4J1U3 117 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms