RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 A0A087WWC5 75 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 A8MWP6 167 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 DEGS1O15121 323 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 UCP3P55916 312 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 PAX5Q02548 391 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 OR8B8Q15620 311 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 TMEM183AQ8IXX5 376 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 FGFRL1Q8N441 504 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 CPT1CQ8TCG5 803 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 WDYHV1Q96HA8 205 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 ASH1LQ9NR48 2969 aaKnown RBP10.97□□□□□ -0.65
SNX1-201ENST00000261889 CA11O75493 328 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 CBR3O75828 277 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 NDUFB4O95168 129 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 VAMP5O95183 116 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 TAS2R60P59551 318 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 FGF12P61328 243 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 ZNF324BQ6AW86 544 aaPredicted RBP10.97□□□□□ -0.65
SNX1-201ENST00000261889 OR10G4Q8NGN3 311 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 OR10G9Q8NGN4 311 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 OR10G7Q8NGN6 311 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 TAF15Q92804 592 aaKnown RBP eCLIP10.97□□□□□ -0.65
SNX1-201ENST00000261889 CHRNA10Q9GZZ6 450 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 OR2D2Q9H210 308 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 VAX2Q9UIW0 290 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 MED13LQ71F56 2210 aa10.97□□□□□ -0.65
SNX1-201ENST00000261889 SLC17A3O00476 420 aa10.96□□□□□ -0.65
SNX1-201ENST00000261889 GYPAP02724 150 aa10.96□□□□□ -0.65
SNX1-201ENST00000261889 CEACAM1P13688 526 aa10.96□□□□□ -0.65
SNX1-201ENST00000261889 ZNF25P17030 456 aaPredicted RBP10.96□□□□□ -0.65
SNX1-201ENST00000261889 H1FOOQ8IZA3 346 aaPredicted RBP10.96□□□□□ -0.65
SNX1-201ENST00000261889 GCNT2Q8N0V5 402 aa10.96□□□□□ -0.65
SNX1-201ENST00000261889 OR5D13Q8NGL4 314 aa10.96□□□□□ -0.65
SNX1-201ENST00000261889 RAB24Q969Q5 203 aa10.96□□□□□ -0.65
SNX1-201ENST00000261889 PITPNC1Q9UKF7 332 aa10.96□□□□□ -0.65
SNX1-201ENST00000261889 PAM16Q9Y3D7 125 aa10.96□□□□□ -0.65
SNX1-201ENST00000261889 RIF1Q5UIP0 2472 aaKnown RBP10.96□□□□□ -0.65
SNX1-201ENST00000261889 H0Y980 276 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 DFFBO76075 338 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 S1PR2O95136 353 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 MAS1LP35410 378 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 MAGEA5P43359 124 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 AESQ08117 197 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 DBX2Q6ZNG2 339 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 DRAM1Q8N682 238 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 RNF138Q8WVD3 245 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 FAM122AQ96E09 287 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 IMMP1LQ96LU5 166 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 WDR61Q9GZS3 305 aaKnown RBP10.96□□□□□ -0.66
SNX1-201ENST00000261889 CISD1Q9NZ45 108 aaKnown RBP10.96□□□□□ -0.66
SNX1-201ENST00000261889 CACNA1HO95180 2353 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 MT-CO3P00414 261 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 OPN1MWP04001 364 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 OPN1MW2P0DN77 364 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 OPN1MW3P0DN78 364 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 OR3A1P47881 315 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 TCEAL6Q6IPX3 200 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 SIRT7Q9NRC8 400 aa10.96□□□□□ -0.66
SNX1-201ENST00000261889 LOC102725191A0A1B0GVB3 256 aa10.95□□□□□ -0.66
SNX1-201ENST00000261889 PFN1P07737 140 aaKnown RBP10.95□□□□□ -0.66
SNX1-201ENST00000261889 CBLN1P23435 193 aa10.95□□□□□ -0.66
SNX1-201ENST00000261889 SRPXP78539 464 aa10.95□□□□□ -0.66
SNX1-201ENST00000261889 KIAA1644Q3SXP7 199 aa10.95□□□□□ -0.66
SNX1-201ENST00000261889 Q6ZVH6 145 aa10.95□□□□□ -0.66
SNX1-201ENST00000261889 FAM58AQ8N1B3 248 aa10.95□□□□□ -0.66
SNX1-201ENST00000261889 SSMEM1Q8WWF3 244 aa10.95□□□□□ -0.66
SNX1-201ENST00000261889 OR51I2Q9H344 312 aa10.95□□□□□ -0.66
SNX1-201ENST00000261889 C17orf98A8MV24 154 aa10.95□□□□□ -0.66
SNX1-201ENST00000261889 TCF15Q12870 199 aa10.95□□□□□ -0.66
SNX1-201ENST00000261889 EDDM3AQ14507 147 aa10.95□□□□□ -0.66
SNX1-201ENST00000261889 JOSD1Q15040 202 aaPredicted RBP10.95□□□□□ -0.66
SNX1-201ENST00000261889 LYSMD4Q5XG99 296 aa10.95□□□□□ -0.66
SNX1-201ENST00000261889 NUFIP2Q7Z417 695 aaKnown RBP10.95□□□□□ -0.66
SNX1-201ENST00000261889 MRGPRDQ8TDS7 321 aa10.95□□□□□ -0.66
SNX1-201ENST00000261889 TRAV34A0A0B4J273 112 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 EPHA8P29322 1005 aaPredicted RBP10.94□□□□□ -0.66
SNX1-201ENST00000261889 SSTR5P35346 364 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 ASCL4Q6XD76 172 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 AGBL5Q8NDL9 886 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 LEAP2Q969E1 77 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 ELOA3CA0A087WX78 387 aaPredicted RBP10.94□□□□□ -0.66
SNX1-201ENST00000261889 KIR2DS1A0A191URI9 304 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 FGF5P12034 268 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 KIR2DS4P43632 304 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 KIR2DS1Q14954 304 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 TOMM20LQ6UXN7 152 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 KDF1Q8NAX2 398 aaPredicted RBP10.94□□□□□ -0.66
SNX1-201ENST00000261889 A0A1B0GW64 132 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 C11orf94C9JXX5 98 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 OR2H2O95918 312 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 LRRC75BQ2VPJ9 315 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 TMEM41BQ5BJD5 291 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 ERASQ7Z444 233 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 C5orf30Q96GV9 206 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 CDH20Q9HBT6 801 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 NAT8Q9UHE5 227 aa10.94□□□□□ -0.66
SNX1-201ENST00000261889 WISP2O76076 250 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 IL3RAP26951 378 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 CDKN1AP38936 164 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 PSMB3P49720 205 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms