RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 LAMTOR1Q6IAA8 161 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 DIRC2Q96SL1 478 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 WNT5BQ9H1J7 359 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 MIXL1Q9H2W2 232 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 GREB1LQ9C091 1923 aaPredicted RBP12.38□□□□□ -0.43
CUX2-201ENST00000261726 UPK3AO75631 287 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 THY1P04216 161 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 BCL2P10415 239 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 PQLC2Q6ZP29 291 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 RBKSQ9H477 322 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 OR4C45A6NMZ5 311 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 DCTN5Q9BTE1 182 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 CHRNA10Q9GZZ6 450 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 GPX1P07203 203 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 UCP2P55851 309 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 STPG2Q8N412 459 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 RNF133Q8WVZ7 376 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 ITLN1Q8WWA0 313 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 GEMIN7Q9H840 131 aaKnown RBP12.37□□□□□ -0.43
CUX2-201ENST00000261726 CYB5R3P00387 301 aaPredicted RBP12.37□□□□□ -0.43
CUX2-201ENST00000261726 LIMS2Q7Z4I7 341 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 HOGA1Q86XE5 327 aa12.37□□□□□ -0.43
CUX2-201ENST00000261726 DLL1O00548 723 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 ZNF645Q8N7E2 425 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 STPG3Q8N7X2 389 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 ZIC3O60481 467 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 PF4P02776 101 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 TMEM177Q53S58 311 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 ZNF826PQ6ZT77 177 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 PIMREGQ9BSJ6 248 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 SMAD7O15105 426 aaKnown RBP12.36□□□□□ -0.43
CUX2-201ENST00000261726 MBNL2Q5VZF2 373 aaKnown RBP12.36□□□□□ -0.43
CUX2-201ENST00000261726 ZPLD1Q8TCW7 415 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 NPFFO15130 113 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 LILRA6Q6PI73 481 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 H1FOOQ8IZA3 346 aaPredicted RBP12.36□□□□□ -0.43
CUX2-201ENST00000261726 KLHDC2Q9Y2U9 406 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 CA11O75493 328 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 SEC11BP0C7V7 166 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 MS4A3Q96HJ5 214 aa12.36□□□□□ -0.43
CUX2-201ENST00000261726 TMEM229AB2RXF0 380 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 OR2H2O95918 312 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 SCTP09683 121 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 SFTPCP11686 197 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 MIC13Q5XKP0 118 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 TLNRD1Q9H1K6 362 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 CISD1Q9NZ45 108 aaKnown RBP12.35□□□□□ -0.43
CUX2-201ENST00000261726 MRPS16Q9Y3D3 137 aaKnown RBP12.35□□□□□ -0.43
CUX2-201ENST00000261726 EIF3GO75821 320 aaKnown RBP eCLIP12.35□□□□□ -0.43
CUX2-201ENST00000261726 SUMO2P61956 95 aaKnown RBP12.35□□□□□ -0.43
CUX2-201ENST00000261726 LEAP2Q969E1 77 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 MBD1Q9UIS9 605 aaPredicted RBP12.35□□□□□ -0.43
CUX2-201ENST00000261726 DTX4Q9Y2E6 619 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 LEPROTL1O95214 131 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 DNAL4O96015 105 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 CELA2AP08217 269 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 ATP5G2Q06055 141 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 SRSF12Q8WXF0 261 aaKnown RBP12.35□□□□□ -0.43
CUX2-201ENST00000261726 OR5AC2Q9NZP5 309 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 SIGLEC5O15389 551 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 TRGC2P03986 189 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 AMY1AP04745 511 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 KLK2P20151 261 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 RND2P52198 227 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 RPL8P62917 257 aaKnown RBP12.35□□□□□ -0.43
CUX2-201ENST00000261726 SIGLEC14Q08ET2 396 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 FAM106AQ4KMX7 169 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 MRPL18Q9H0U6 180 aaKnown RBP12.35□□□□□ -0.43
CUX2-201ENST00000261726 SOX21Q9Y651 276 aaPredicted RBP12.35□□□□□ -0.43
CUX2-201ENST00000261726 PLXNB2O15031 1838 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 PSG4Q00888 419 aa12.35□□□□□ -0.43
CUX2-201ENST00000261726 SLC25A17O43808 307 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 CEACAM21Q3KPI0 293 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 TMEM136Q6ZRR5 245 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 CENPVQ7Z7K6 275 aaPredicted RBP12.34□□□□□ -0.43
CUX2-201ENST00000261726 HMGCLL1Q8TB92 370 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 WBP1LQ9NX94 342 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 CCL27Q9Y4X3 112 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 MMP16P51512 607 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 PARLQ9H300 379 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 MGST3O14880 152 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 SPINT1O43278 529 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 GDF9O60383 454 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 MUC1P15941 1255 aaPredicted RBP12.34□□□□□ -0.43
CUX2-201ENST00000261726 MC5RP33032 325 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 COPS9Q8WXC6 57 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 GALNT14Q96FL9 552 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 MFAP4P55083 255 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 PSG9Q00887 426 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 ZNF721Q8TF20 911 aa12.34□□□□□ -0.43
CUX2-201ENST00000261726 SOD3P08294 240 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 ZNF385CQ66K41 422 aaPredicted RBP12.33□□□□□ -0.44
CUX2-201ENST00000261726 ATOH7Q8N100 152 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 SHISA5Q8N114 240 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 ZNF107Q9UII5 783 aaPredicted RBP12.33□□□□□ -0.44
CUX2-201ENST00000261726 IGHV3-35A0A0C4DH35 117 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 PLPPR5Q32ZL2 321 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 NUDT10Q8NFP7 164 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 NUDT11Q96G61 164 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 GPHA2Q96T91 129 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms