RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 CMTM2Q8TAZ6 248 aa12.5□□□□□ -0.41
MSI1-201ENST00000257552 DERL1Q9BUN8 251 aa12.5□□□□□ -0.41
MSI1-201ENST00000257552 MSL2Q9HCI7 577 aa12.5□□□□□ -0.41
MSI1-201ENST00000257552 MTCH1Q9NZJ7 389 aa12.5□□□□□ -0.41
MSI1-201ENST00000257552 A0A0G2JMM0 328 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 A0A1W2PPB8 328 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 A0A1W2PRS3 328 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 KIR3DP1A8MWS1 328 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 VAMP5O95183 116 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 TYMSP04818 313 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 PPP1CBP62140 327 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 RNPS1Q15287 305 aaKnown RBP12.49□□□□□ -0.41
MSI1-201ENST00000257552 CEACAM16Q2WEN9 425 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 FFAR4Q5NUL3 377 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 C9orf135Q5VTT2 229 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 SLC23A3Q6PIS1 610 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 NEIL1Q96FI4 390 aaPredicted RBP12.49□□□□□ -0.41
MSI1-201ENST00000257552 IMMP2LQ96T52 175 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 OR2H1Q9GZK4 316 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 FGF23Q9GZV9 251 aaPredicted RBP12.49□□□□□ -0.41
MSI1-201ENST00000257552 PPIAL4AQ9Y536 164 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 C11orf94C9JXX5 98 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 M0QZK8 103 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 TP53I11O14683 189 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 TRAPPC6AO75865 159 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 CLDN15P56746 228 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 RPL15P61313 204 aaKnown RBP12.49□□□□□ -0.41
MSI1-201ENST00000257552 ZNF324BQ6AW86 544 aaPredicted RBP12.49□□□□□ -0.41
MSI1-201ENST00000257552 Q6ZWC4 215 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 TMPRSS7Q7RTY8 843 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 RPS19BP1Q86WX3 136 aaKnown RBP12.49□□□□□ -0.41
MSI1-201ENST00000257552 VN1R17PQ8TDU5 208 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 DTD1Q8TEA8 209 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 EXPH5Q8NEV8 1989 aa12.49□□□□□ -0.41
MSI1-201ENST00000257552 SYNGR1O43759 233 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 CTXN2P0C2S0 81 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 BRS3P32247 399 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 CDKN1AP38936 164 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 SGMS2Q8NHU3 365 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 OR5P3Q8WZ94 311 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 IMMP1LQ96LU5 166 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 CTXND1A0A1B0GTU2 59 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 TCF21O43680 179 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 ADMP35318 185 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 FOLR3P41439 243 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 DUSP3P51452 185 aaPredicted RBP12.48□□□□□ -0.41
MSI1-201ENST00000257552 FGF12P61328 243 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 MRPS11P82912 194 aaKnown RBP12.48□□□□□ -0.41
MSI1-201ENST00000257552 PRDX4Q13162 271 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 OR2Y1Q8NGV0 311 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 WDYHV1Q96HA8 205 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 FOXB1Q99853 325 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 TMEM106BQ9NUM4 274 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 MRPS18CQ9Y3D5 142 aaKnown RBP12.48□□□□□ -0.41
MSI1-201ENST00000257552 PXMP4Q9Y6I8 212 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 DOCK11Q5JSL3 2073 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 TRAPPC2LH3BP13 241 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 ZIC3O60481 467 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 NDUFB4O95168 129 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 SSR4P51571 173 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 TFF3Q07654 80 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 IGFBP7Q16270 282 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 Q6ZS49 121 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 AAED1Q7RTV5 226 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 YRDCQ86U90 279 aaKnown RBP12.48□□□□□ -0.41
MSI1-201ENST00000257552 ZNF114Q8NC26 417 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 PSMF1Q92530 271 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 HSPB9Q9BQS6 159 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 TMEM204Q9BSN7 226 aa12.48□□□□□ -0.41
MSI1-201ENST00000257552 RIF1Q5UIP0 2472 aaKnown RBP12.47□□□□□ -0.41
MSI1-201ENST00000257552 LNP1A1A4G5 178 aa12.47□□□□□ -0.41
MSI1-201ENST00000257552 TRA2AQ13595 282 aaKnown RBP eCLIP12.47□□□□□ -0.41
MSI1-201ENST00000257552 ACSF3Q4G176 576 aaPredicted RBP12.47□□□□□ -0.41
MSI1-201ENST00000257552 SPINK9Q5DT21 86 aa12.47□□□□□ -0.41
MSI1-201ENST00000257552 TIPARPQ7Z3E1 657 aaKnown RBP12.47□□□□□ -0.41
MSI1-201ENST00000257552 LINC01551Q86U37 167 aa12.47□□□□□ -0.41
MSI1-201ENST00000257552 MIEN1Q9BRT3 115 aa12.47□□□□□ -0.41
MSI1-201ENST00000257552 OR2J1Q9GZK6 312 aa12.47□□□□□ -0.41
MSI1-201ENST00000257552 ZDHHC11Q9H8X9 412 aa12.47□□□□□ -0.41
MSI1-201ENST00000257552 WDR54Q9H977 334 aa12.47□□□□□ -0.41
MSI1-201ENST00000257552 CLN8Q9UBY8 286 aa12.47□□□□□ -0.41
MSI1-201ENST00000257552 SPTBN2O15020 2390 aa12.47□□□□□ -0.41
MSI1-201ENST00000257552 DSPP15924 2871 aaKnown RBP12.47□□□□□ -0.41
MSI1-201ENST00000257552 DKK1O94907 266 aa12.47□□□□□ -0.41
MSI1-201ENST00000257552 ZNF585BQ52M93 769 aa12.47□□□□□ -0.41
MSI1-201ENST00000257552 CPEB3Q8NE35 698 aaKnown RBP12.47□□□□□ -0.41
MSI1-201ENST00000257552 LOXL2Q9Y4K0 774 aa12.47□□□□□ -0.41
MSI1-201ENST00000257552 SIAH2O43255 324 aa12.46□□□□□ -0.41
MSI1-201ENST00000257552 SLC25A6P12236 298 aa12.46□□□□□ -0.41
MSI1-201ENST00000257552 ATP5G3P48201 142 aa12.46□□□□□ -0.41
MSI1-201ENST00000257552 LCN2P80188 198 aa12.46□□□□□ -0.41
MSI1-201ENST00000257552 MKXQ8IYA7 352 aa12.46□□□□□ -0.41
MSI1-201ENST00000257552 PROK2Q9HC23 129 aa12.46□□□□□ -0.41
MSI1-201ENST00000257552 R4GN57 208 aa12.46□□□□□ -0.41
MSI1-201ENST00000257552 CBLN1P23435 193 aa12.46□□□□□ -0.42
MSI1-201ENST00000257552 FKBP2P26885 142 aaKnown RBP12.46□□□□□ -0.42
MSI1-201ENST00000257552 THBS3P49746 956 aa12.46□□□□□ -0.42
MSI1-201ENST00000257552 TMEM9BQ9NQ34 198 aa12.46□□□□□ -0.42
MSI1-201ENST00000257552 RYDENQ9NUL5 291 aaKnown RBP12.46□□□□□ -0.42
MSI1-201ENST00000257552 LOC102723996A0A087X1L8 192 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms