RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 WDR86Q86TI4 376 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 MRPL41Q8IXM3 137 aaKnown RBP11.29□□□□□ -0.6
H3F3B-201ENST00000254810 HLA-CQ95604 372 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 APOBEC3DQ96AK3 386 aaPredicted RBP11.29□□□□□ -0.6
H3F3B-201ENST00000254810 POM121L2Q96KW2 1035 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 USF3Q68DE3 2245 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 CTXND1A0A1B0GTU2 59 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 NPIPB11E5RHQ5 1161 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 K7ESF4 209 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 KRASP01116 189 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 CYC1P08574 325 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 CD33P20138 364 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 IL3RAP26951 378 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 G0S2P27469 103 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 LINC00205P59089 165 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 LBHQ53QV2 105 aaPredicted RBP11.29□□□□□ -0.6
H3F3B-201ENST00000254810 FFAR4Q5NUL3 377 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 FAM78BQ5VT40 261 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 FIP1L1Q6UN15 594 aaKnown RBP11.29□□□□□ -0.6
H3F3B-201ENST00000254810 TMPRSS7Q7RTY8 843 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 LRP11Q86VZ4 500 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 ZNF114Q8NC26 417 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 IFI44Q8TCB0 444 aa11.29□□□□□ -0.6
H3F3B-201ENST00000254810 SOX15O60248 233 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 BRWD1-AS2P59051 145 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 VASH2Q86V25 355 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 GBGT1Q8N5D6 347 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 DUSP23Q9BVJ7 150 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 TIMM9Q9Y5J7 89 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 SELEP16581 610 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 IGFBP4P22692 258 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 HOXA6P31267 233 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 OTX2P32243 289 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 MPLP40238 635 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 RPL15P61313 204 aaKnown RBP11.28□□□□□ -0.6
H3F3B-201ENST00000254810 ZNF816Q0VGE8 651 aaPredicted RBP11.28□□□□□ -0.6
H3F3B-201ENST00000254810 IL11RAQ14626 422 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 SPINK14Q6IE38 97 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 PPP1R32Q7Z5V6 425 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 TMEM45BQ96B21 275 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 PHF7Q9BWX1 381 aaPredicted RBP11.28□□□□□ -0.6
H3F3B-201ENST00000254810 ZNF576Q9H609 170 aa11.28□□□□□ -0.6
H3F3B-201ENST00000254810 LIN7CQ9NUP9 197 aaKnown RBP11.28□□□□□ -0.6
H3F3B-201ENST00000254810 POLR3KQ9Y2Y1 108 aaPredicted RBP11.28□□□□□ -0.6
H3F3B-201ENST00000254810 FAM186AA6NE01 2351 aa11.27□□□□□ -0.6
H3F3B-201ENST00000254810 ZG16O60844 167 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 OR2H2O95918 312 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 TYMSP04818 313 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 C1QTNF9P0C862 333 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 CEBPDP49716 269 aaPredicted RBP11.27□□□□□ -0.61
H3F3B-201ENST00000254810 TCEAL6Q6IPX3 200 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 ZNF497Q6ZNH5 498 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 TCF23Q7RTU1 214 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 HSPB7Q9UBY9 170 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 TRAPPC2LQ9UL33 140 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 ODAMA1E959 279 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 P0C879 139 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 GCH1P30793 250 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 ATP5G3P48201 142 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 GNB1P62873 340 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 LINC00596Q86U02 117 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 ZNF808Q8N4W9 903 aaPredicted RBP11.27□□□□□ -0.61
H3F3B-201ENST00000254810 TMEM18Q96B42 140 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 NPCDR1Q9BY65 106 aa11.27□□□□□ -0.61
H3F3B-201ENST00000254810 CNN1P51911 297 aaKnown RBP11.26□□□□□ -0.61
H3F3B-201ENST00000254810 UBE2G2P60604 165 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 ZXDAP98168 799 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 LINC01551Q86U37 167 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 SPEM1Q8N4L4 309 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 Q8N7P7 452 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 NEIL1Q96FI4 390 aaPredicted RBP11.26□□□□□ -0.61
H3F3B-201ENST00000254810 HES7Q9BYE0 225 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 DOCK10Q96BY6 2186 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 IGKV3D-15A0A087WSY6 115 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 C11orf94C9JXX5 98 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 MLNRO43193 412 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 S1PR2O95136 353 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 TFF1P04155 84 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 FOLR3P41439 243 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 GNG3P63215 75 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 NRN1LQ496H8 165 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 ZNF573Q86YE8 665 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 CISD2Q8N5K1 135 aaKnown RBP11.26□□□□□ -0.61
H3F3B-201ENST00000254810 ANAPC16Q96DE5 110 aa11.26□□□□□ -0.61
H3F3B-201ENST00000254810 COL6A3P12111 3177 aa11.25□□□□□ -0.61
H3F3B-201ENST00000254810 ANKRD30BLA7E2S9 258 aa11.25□□□□□ -0.61
H3F3B-201ENST00000254810 SCGB1D1O95968 90 aa11.25□□□□□ -0.61
H3F3B-201ENST00000254810 MT-CO3P00414 261 aa11.25□□□□□ -0.61
H3F3B-201ENST00000254810 C3AR1Q16581 482 aa11.25□□□□□ -0.61
H3F3B-201ENST00000254810 WDYHV1Q96HA8 205 aa11.25□□□□□ -0.61
H3F3B-201ENST00000254810 TMEM147Q9BVK8 224 aa11.25□□□□□ -0.61
H3F3B-201ENST00000254810 FKBP11Q9NYL4 201 aa11.25□□□□□ -0.61
H3F3B-201ENST00000254810 TRAV38-1A0A0B4J264 116 aa11.25□□□□□ -0.61
H3F3B-201ENST00000254810 C17orf98A8MV24 154 aa11.25□□□□□ -0.61
H3F3B-201ENST00000254810 RBFOX2O43251 390 aaKnown RBP eCLIP11.25□□□□□ -0.611e-6■■■□□ 18.4
H3F3B-201ENST00000254810 SRP14P37108 136 aaKnown RBP11.25□□□□□ -0.61
H3F3B-201ENST00000254810 LHX2P50458 406 aa11.25□□□□□ -0.61
H3F3B-201ENST00000254810 RAB4BP61018 213 aa11.25□□□□□ -0.61
H3F3B-201ENST00000254810 TDRG1Q3Y452 100 aa11.25□□□□□ -0.61
H3F3B-201ENST00000254810 BTNL3Q6UXE8 466 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms