RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 RPL8P62917 257 aaKnown RBP7.49□□□□□ -1.21
PTCD3-201ENST00000254630 TMEM45BQ96B21 275 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 TLNRD1Q9H1K6 362 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 OPN4Q9UHM6 478 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 TNFSF18Q9UNG2 199 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 KCNK7Q9Y2U2 307 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 IGHV3OR16-10A0A075B7F0 116 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 TRAV34A0A0B4J273 112 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 MELTFP08582 738 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 VSIG10L2P0DP72 767 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 ATP6V0CP27449 155 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 OR10J1P30954 320 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 ACSF3Q4G176 576 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-201ENST00000254630 EEF1AKMT3Q96AZ1 226 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 JPT1Q9UK76 154 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 OR4C46A6NHA9 309 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 KIR2DL2P43627 348 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-201ENST00000254630 SUCLG1P53597 346 aaKnown RBP7.49□□□□□ -1.21
PTCD3-201ENST00000254630 SLC25A53Q5H9E4 307 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 SCNM1Q9BWG6 230 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 TMEM222Q9H0R3 208 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 PRO1933Q9H354 126 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 G6PC2Q9NQR9 355 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 DLL3Q9NYJ7 618 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 FUT9Q9Y231 359 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 IGHV3OR16-12A0A075B7B8 117 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 B9A039 149 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 PPP1R32Q7Z5V6 425 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 FDCSPQ8NFU4 85 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 TRBV5-7A0A0A0MS05 114 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 MFAP4P55083 255 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 SCGB1D4Q6XE38 83 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 STPG2Q8N412 459 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 LEAP2Q969E1 77 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF430Q9H8G1 570 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-201ENST00000254630 TMEM140Q9NV12 185 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 TRAV30A0A087WSZ9 112 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 LNP1A1A4G5 178 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 CGB1A6NKQ9 187 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 HOXA6P31267 233 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 LAMTOR1Q6IAA8 161 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 OR5P3Q8WZ94 311 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 SIGLEC12Q96PQ1 595 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 CLEC7AQ9BXN2 247 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 OR5AC2Q9NZP5 309 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 IL19Q9UHD0 177 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 IGKV1D-42A0A075B6H8 117 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 hCG_38984A0A1B0GV85 526 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 TMEM229AB2RXF0 380 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 AP4M1O00189 453 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 REG1AP05451 166 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 SEC11BP0C7V7 166 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 FAM53AQ6NSI3 398 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-201ENST00000254630 MMD2Q8IY49 270 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 MRPL30Q8TCC3 161 aaKnown RBP7.48□□□□□ -1.21
PTCD3-201ENST00000254630 TMEM218A2RU14 115 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF729A6NN14 1252 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-201ENST00000254630 SNURFLB1AK76 121 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF253O75346 499 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 RAX2Q96IS3 184 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 TIMP4Q99727 224 aa7.48□□□□□ -1.21
PTCD3-201ENST00000254630 ODAMA1E959 279 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF883P0CG24 379 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 APOBEC3AP31941 199 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-201ENST00000254630 TMEM30BQ3MIR4 351 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 WFDC6Q9BQY6 131 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 LINC00470Q9BZP3 86 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF703Q9H7S9 590 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-201ENST00000254630 IL17BQ9UHF5 180 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 PLA2G10O15496 165 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 RELQ04864 619 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-201ENST00000254630 ELOVL1Q9BW60 279 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 FOXD3Q9UJU5 478 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-201ENST00000254630 OTOFQ9HC10 1997 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 SYNGR3O43761 229 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 LIPFP07098 398 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 FAM106AQ4KMX7 169 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF880Q6PDB4 577 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 WDFY1Q8IWB7 410 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 H1FOOQ8IZA3 346 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-201ENST00000254630 LRRC75AQ8NAA5 344 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 KCNE5Q9UJ90 142 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 LINC00869P0C866 280 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 CXorf66Q5JRM2 361 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-201ENST00000254630 PNKDQ8N490 385 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 STPG3Q8N7X2 389 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 POM121Q96HA1 1249 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 HKR1P10072 659 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 WDR25Q64LD2 544 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-201ENST00000254630 FADS6Q8N9I5 356 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 SSBP3Q9BWW4 388 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-201ENST00000254630 BET1LQ9NYM9 111 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 RALYQ9UKM9 306 aaKnown RBP7.47□□□□□ -1.21
PTCD3-201ENST00000254630 TMEM56-RWDD3S4R434 201 aa7.47□□□□□ -1.21
PTCD3-201ENST00000254630 FOXH1O75593 365 aa7.46□□□□□ -1.21
PTCD3-201ENST00000254630 OR2A4O95047 310 aa7.46□□□□□ -1.21
PTCD3-201ENST00000254630 PF4P02776 101 aa7.46□□□□□ -1.21
PTCD3-201ENST00000254630 FCGR2BP31994 310 aaPredicted RBP7.46□□□□□ -1.21
PTCD3-201ENST00000254630 RPL29P47914 159 aaKnown RBP7.46□□□□□ -1.21
PTCD3-201ENST00000254630 DLX1P56177 255 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms