RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 FGFRL1Q8N441 504 aa12.84□□□□□ -0.35
PMPCB-201ENST00000249269 GJC3Q8NFK1 279 aa12.84□□□□□ -0.35
PMPCB-201ENST00000249269 RNF115Q9Y4L5 304 aa12.84□□□□□ -0.35
PMPCB-201ENST00000249269 ARHGEF17Q96PE2 2063 aaPredicted RBP12.83□□□□□ -0.36
PMPCB-201ENST00000249269 SPAARA0A1B0GVQ0 90 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 FAM90A27PA6NNH2 459 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 PRKNO60260 465 aaPredicted RBP12.83□□□□□ -0.36
PMPCB-201ENST00000249269 SOD3P08294 240 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 GUCA1AP43080 201 aaPredicted RBP12.83□□□□□ -0.36
PMPCB-201ENST00000249269 NRN1LQ496H8 165 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 KHDC1LQ5JSQ8 128 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 SP5Q6BEB4 398 aaPredicted RBP12.83□□□□□ -0.36
PMPCB-201ENST00000249269 METTL27Q8N6F8 245 aaPredicted RBP12.83□□□□□ -0.36
PMPCB-201ENST00000249269 VDAC3Q9Y277 283 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 CENPFP49454 3210 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 PSMB11A5LHX3 300 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 RBFOX3A6NFN3 312 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 SHISA7A6NL88 538 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 TRAF3IP2O43734 574 aaPredicted RBP12.83□□□□□ -0.36
PMPCB-201ENST00000249269 ORM1P02763 201 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 ACSF3Q4G176 576 aaPredicted RBP12.83□□□□□ -0.36
PMPCB-201ENST00000249269 C10orf128Q5T292 105 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 TEX38Q6PEX7 206 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 NIT1Q86X76 327 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 SFTPA2Q8IWL1 248 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 TMEM217Q8N7C4 229 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 ABHD14AQ9BUJ0 271 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 IL36GQ9NZH8 169 aa12.83□□□□□ -0.36
PMPCB-201ENST00000249269 TRAV1-1A0A0B4J248 108 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 ZNF732B4DXR9 585 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 PAGE4O60829 102 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 FCN3O75636 299 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 TYMSP04818 313 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 PSG1P11464 419 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 TCL1AP56279 114 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 PNRC1Q12796 327 aaPredicted RBP12.82□□□□□ -0.36
PMPCB-201ENST00000249269 ZNF474Q6S9Z5 364 aaPredicted RBP12.82□□□□□ -0.36
PMPCB-201ENST00000249269 FBXW12Q6X9E4 464 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 RTN4IP1Q8WWV3 396 aaPredicted RBP12.82□□□□□ -0.36
PMPCB-201ENST00000249269 V9GYY9 64 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 A0A1B0GX78 115 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 CDC14CA4D256 554 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 B5MCH6 92 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 GFRA1P56159 465 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 MTCP1P56278 107 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 PAFAH1B2P68402 229 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 MRPS34P82930 218 aaKnown RBP12.82□□□□□ -0.36
PMPCB-201ENST00000249269 ZNF506Q5JVG8 444 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 MRPL14Q6P1L8 145 aaKnown RBP12.82□□□□□ -0.36
PMPCB-201ENST00000249269 CRIP3Q6Q6R5 217 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 TMEM92Q6UXU6 159 aa12.82□□□□□ -0.36
PMPCB-201ENST00000249269 CHD3Q12873 2000 aaKnown RBP12.81□□□□□ -0.36
PMPCB-201ENST00000249269 FOXF1Q12946 379 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 MYBPHQ13203 477 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 Q6ZS49 121 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 FAM57BQ71RH2 274 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 APCDD1LQ8NCL9 501 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 MOB3AQ96BX8 217 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 MSI2Q96DH6 328 aaKnown RBP12.81□□□□□ -0.36
PMPCB-201ENST00000249269 VN1R1Q9GZP7 353 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 C11orf1Q9H5F2 150 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 PLEKHF2Q9H8W4 249 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 DOCK8Q8NF50 2099 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 HSD17B6O14756 317 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 WISP1O95388 367 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 RND3P61587 244 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 WDR74Q6RFH5 385 aaPredicted RBP12.81□□□□□ -0.36
PMPCB-201ENST00000249269 SLC35G3Q8N808 338 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 OR5B12Q96R08 314 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 PRR13Q9NZ81 148 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 CLN8Q9UBY8 286 aa12.81□□□□□ -0.36
PMPCB-201ENST00000249269 ATG2AQ2TAZ0 1938 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 SH2D7A6NKC9 451 aaPredicted RBP12.8□□□□□ -0.36
PMPCB-201ENST00000249269 C1orf61Q13536 156 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 PCOLCEQ15113 449 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 TVP23CQ96ET8 276 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 MIEN1Q9BRT3 115 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 ZNF319Q9P2F9 582 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 IGLV3-12A0A075B6K2 115 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 A0A087WX48 190 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 A0A1W2PR80 420 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 FREM3P0C091 2139 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 H2BFWTQ7Z2G1 175 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 PLXDC1Q8IUK5 500 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 FBXL14Q8N1E6 418 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 GBGT1Q8N5D6 347 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 APOBEC3DQ96AK3 386 aaPredicted RBP12.8□□□□□ -0.36
PMPCB-201ENST00000249269 SPACA5Q96QH8 159 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 RPP25Q9BUL9 199 aaKnown RBP12.8□□□□□ -0.36
PMPCB-201ENST00000249269 SMIM3Q9BZL3 60 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 ZNF286AQ9HBT8 521 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 ERG28Q9UKR5 140 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 ADAMTS9Q9P2N4 1935 aa12.8□□□□□ -0.36
PMPCB-201ENST00000249269 A0A1W2PP11 408 aa12.79□□□□□ -0.36
PMPCB-201ENST00000249269 GLIPR1P48060 266 aa12.79□□□□□ -0.36
PMPCB-201ENST00000249269 EWSR1Q01844 656 aaKnown RBP eCLIP12.79□□□□□ -0.36
PMPCB-201ENST00000249269 FAM214BQ7L5A3 538 aa12.79□□□□□ -0.36
PMPCB-201ENST00000249269 SPTSSAQ969W0 71 aa12.79□□□□□ -0.36
PMPCB-201ENST00000249269 APH1AQ96BI3 265 aa12.79□□□□□ -0.36
PMPCB-201ENST00000249269 MCTS1Q9ULC4 181 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms