RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 SPSB4Q96A44 273 aa9.44□□□□□ -0.9
RFPL3-201ENST00000249007 RNFT2Q96EX2 444 aa9.44□□□□□ -0.9
RFPL3-201ENST00000249007 SDSLQ96GA7 329 aa9.44□□□□□ -0.9
RFPL3-201ENST00000249007 ABHD1Q96SE0 405 aa9.44□□□□□ -0.9
RFPL3-201ENST00000249007 TM2D3Q9BRN9 247 aa9.44□□□□□ -0.9
RFPL3-201ENST00000249007 FUZQ9BT04 418 aa9.44□□□□□ -0.9
RFPL3-201ENST00000249007 RTL8AQ9BWD3 113 aa9.44□□□□□ -0.9
RFPL3-201ENST00000249007 SRA1Q9HD15 236 aaKnown RBP9.44□□□□□ -0.9
RFPL3-201ENST00000249007 B9D1Q9UPM9 204 aa9.44□□□□□ -0.9
RFPL3-201ENST00000249007 GOLT1BQ9Y3E0 138 aa9.44□□□□□ -0.9
RFPL3-201ENST00000249007 IER3IP1Q9Y5U9 82 aa9.44□□□□□ -0.9
RFPL3-201ENST00000249007 ENPP4Q9Y6X5 453 aa9.44□□□□□ -0.9
RFPL3-201ENST00000249007 A0A1W2PN81 502 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 DLEU1O43261 78 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 NDUFB2O95178 105 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 HLA-DQA2P01906 255 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 IGHV1-8P0DP01 117 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 TMEM11P17152 192 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 CHRNA7P36544 502 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 CCR6P51684 374 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 EFNB1P98172 346 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 FAM3AP98173 230 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 RHEBQ15382 184 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 ZNF260Q3ZCT1 412 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 MINOS1Q5TGZ0 78 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 CALHM1Q8IU99 346 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 OR56B1Q8NGI3 324 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 OR2T27Q8NH04 317 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 DTD1Q8TEA8 209 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 PHYHIPQ92561 330 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 NIPSNAP1Q9BPW8 284 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 NRIP2Q9BQI9 281 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 RHCGQ9UBD6 479 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 RHBDD3Q9Y3P4 386 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 MINOS1-NBL1R4GNA1 71 aa9.43□□□□□ -0.9
RFPL3-201ENST00000249007 HECTD4Q9Y4D8 3996 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 TRAV1-2A0A0B4J238 106 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 A0A1W2PPQ1 181 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 A6NJY4 79 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 C17orf98A8MV24 154 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 FGF7P21781 194 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 GABRR1P24046 479 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 HTR2CP28335 458 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 BDKRB2P30411 391 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 NPBWR1P48145 328 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 PPT1P50897 306 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 DLX6P56179 175 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 TAS2R43P59537 309 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 DEFB136Q30KP8 78 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 ACOT7LQ6ZUV0 252 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 VTCN1Q7Z7D3 282 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 ZFP82Q8N141 532 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 OR2AK2Q8NG84 335 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 OR4Q3Q8NH05 313 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 OR8U1Q8NH10 309 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 MISP3Q96FF7 219 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 GPX7Q96SL4 187 aaPredicted RBP9.42□□□□□ -0.9
RFPL3-201ENST00000249007 HRASLSQ9HDD0 168 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 TAS2R8Q9NYW2 309 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 FBXO7Q9Y3I1 522 aa9.42□□□□□ -0.9
RFPL3-201ENST00000249007 UNC119BA6NIH7 251 aa9.41□□□□□ -0.9
RFPL3-201ENST00000249007 A8MWP6 167 aa9.41□□□□□ -0.9
RFPL3-201ENST00000249007 F8VVB4 439 aa9.41□□□□□ -0.9
RFPL3-201ENST00000249007 F8VWA3 439 aa9.41□□□□□ -0.9
RFPL3-201ENST00000249007 SPDEFO95238 335 aa9.41□□□□□ -0.9
RFPL3-201ENST00000249007 EIF4EP06730 217 aaKnown RBP9.41□□□□□ -0.9
RFPL3-201ENST00000249007 MPZP25189 248 aa9.41□□□□□ -0.9
RFPL3-201ENST00000249007 SSBP1Q04837 148 aaKnown RBP9.41□□□□□ -0.9
RFPL3-201ENST00000249007 C21orf62-AS1Q17RA5 79 aa9.41□□□□□ -0.9
RFPL3-201ENST00000249007 MBOAT2Q6ZWT7 520 aa9.41□□□□□ -0.9
RFPL3-201ENST00000249007 SAMD12Q8N8I0 201 aa9.41□□□□□ -0.9
RFPL3-201ENST00000249007 CCDC107Q8WV48 283 aa9.41□□□□□ -0.9
RFPL3-201ENST00000249007 FNDC11Q9BVV2 318 aa9.41□□□□□ -0.9
RFPL3-201ENST00000249007 SIGLEC7Q9Y286 467 aa9.41□□□□□ -0.9
RFPL3-201ENST00000249007 EXOGQ9Y2C4 368 aaKnown RBP9.41□□□□□ -0.9
RFPL3-201ENST00000249007 TNCP24821 2201 aa9.41□□□□□ -0.9
RFPL3-201ENST00000249007 A0A087WUU8 490 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 FXYD6-FXYD2A0A087WZ82 144 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 ANKRD20A5PA0PJZ0 165 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 TXNDC12O95881 172 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 IGHA1P01876 353 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 RBP4P02753 201 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 TPT1P13693 172 aaKnown RBP9.4□□□□□ -0.9
RFPL3-201ENST00000249007 HLA-GP17693 338 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 BRS3P32247 399 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 DCTDP32321 178 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 GDNFP39905 211 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 RPS27P42677 84 aaKnown RBP9.4□□□□□ -0.9
RFPL3-201ENST00000249007 CAV2P51636 162 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 SCAND1P57086 179 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 FAM27D1Q5T7N8 215 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 GLT8D1Q68CQ7 371 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 AWAT2Q6E213 333 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 OR10K2Q6IF99 312 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 RAB12Q6IQ22 244 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 SFXN4Q6P4A7 337 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 ZNF546Q86UE3 836 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 AQP11Q8NBQ7 271 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 CSNK2A3Q8NEV1 391 aa9.4□□□□□ -0.9
RFPL3-201ENST00000249007 OR1S2Q8NGQ3 325 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms