RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 C12orf77C9JDV5 145 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 M0R1B8 84 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 MT-ND4LP03901 98 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 IL2RGP31785 369 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 GLIPR1P48060 266 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 FAM180AQ6UWF9 173 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 WDR82Q6UXN9 313 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 DRAM1Q8N682 238 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 DTD1Q8TEA8 209 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 C11orf1Q9H5F2 150 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 CACFD1Q9UGQ2 172 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 SEC11BP0C7V7 166 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 MDH2P40926 338 aaKnown RBP13.25□□□□□ -0.29
LRFN1-201ENST00000248668 RPS10P46783 165 aaKnown RBP13.25□□□□□ -0.29
LRFN1-201ENST00000248668 ID3Q02535 119 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 OR2D2Q9H210 308 aa13.25□□□□□ -0.29
LRFN1-201ENST00000248668 C7orf77A4D0Y5 90 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 IFITM10A6NMD0 228 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 ZNF718Q3SXZ3 478 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 SPRNQ5BIV9 151 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 ARV1Q9H2C2 271 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 PLSCR4Q9NRQ2 329 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 KCNIP1Q9NZI2 227 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 IGHV3OR15-7A0A075B7D8 119 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 J3QW42 95 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 COL10A1Q03692 680 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 ZNF816Q0VGE8 651 aaPredicted RBP13.24□□□□□ -0.29
LRFN1-201ENST00000248668 KIAA0141Q14154 515 aaPredicted RBP13.24□□□□□ -0.29
LRFN1-201ENST00000248668 EGLN1Q9GZT9 426 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 CXXC4Q9H2H0 198 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 ATRXP46100 2492 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 RAMP3O60896 148 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 IGKV1-5P01602 117 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 CEBPGP53567 150 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 PAX9P55771 341 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 SLC25A24Q6NUK1 477 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 LRRC29Q8WV35 223 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 COQ2Q96H96 371 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 SH3BGRL2Q9UJC5 107 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 IGF2RP11717 2491 aa13.24□□□□□ -0.29
LRFN1-201ENST00000248668 PHOX2AO14813 284 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 HBZP02008 142 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 ACP7Q6ZNF0 438 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 PRSS33Q8NF86 280 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 SLC25A31Q9H0C2 315 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 A0A1B0GWJ7 208 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 TMEM30CPA0ZSE6 113 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 OR5H1A6NKK0 313 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 NUDT19A8MXV4 375 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 AHRRA9YTQ3 701 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 RPS16P62249 146 aaKnown RBP13.23□□□□□ -0.29
LRFN1-201ENST00000248668 GUK1Q16774 197 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 ZNF585BQ52M93 769 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 MOB1BQ7L9L4 216 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 RNF115Q9Y4L5 304 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 TLN1Q9Y490 2541 aaKnown RBP13.23□□□□□ -0.29
LRFN1-201ENST00000248668 TMEM210A6NLX4 147 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 KRASP01116 189 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 CD5P06127 495 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 METTL15P1P0C7V9 234 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 DDTP30046 118 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 SNCAP37840 140 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 DVL1P1P54792 670 aaPredicted RBP13.23□□□□□ -0.29
LRFN1-201ENST00000248668 CCL20P78556 96 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 GALMQ96C23 342 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 PRDM13Q9H4Q3 707 aa13.23□□□□□ -0.29
LRFN1-201ENST00000248668 TSTD3H0UI37 97 aa13.22□□□□□ -0.29
LRFN1-201ENST00000248668 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.22□□□□□ -0.29
LRFN1-201ENST00000248668 CGAP01215 116 aa13.22□□□□□ -0.29
LRFN1-201ENST00000248668 GNG10P50151 68 aa13.22□□□□□ -0.29
LRFN1-201ENST00000248668 ZNF266Q14584 549 aa13.22□□□□□ -0.29
LRFN1-201ENST00000248668 FAM201AQ5SY85 155 aa13.22□□□□□ -0.29
LRFN1-201ENST00000248668 ZNF474Q6S9Z5 364 aaPredicted RBP13.22□□□□□ -0.29
LRFN1-201ENST00000248668 OR13A1Q8NGR1 328 aa13.22□□□□□ -0.29
LRFN1-201ENST00000248668 ABHD14BQ96IU4 210 aa13.22□□□□□ -0.29
LRFN1-201ENST00000248668 MBNL3Q9NUK0 354 aaKnown RBP13.22□□□□□ -0.29
LRFN1-201ENST00000248668 PITX3O75364 302 aa13.22□□□□□ -0.29
LRFN1-201ENST00000248668 OR13C7P0DN81 318 aa13.22□□□□□ -0.29
LRFN1-201ENST00000248668 EGR1P18146 543 aa13.22□□□□□ -0.29
LRFN1-201ENST00000248668 HMGN3Q15651 99 aa13.22□□□□□ -0.29
LRFN1-201ENST00000248668 ZNF295-AS1Q8N0V1 137 aa13.22□□□□□ -0.29
LRFN1-201ENST00000248668 RARRES2Q99969 163 aa13.22□□□□□ -0.29
LRFN1-201ENST00000248668 ZNF25P17030 456 aaPredicted RBP13.21□□□□□ -0.29
LRFN1-201ENST00000248668 PLA2G5P39877 138 aa13.21□□□□□ -0.29
LRFN1-201ENST00000248668 RPL30P62888 115 aaKnown RBP13.21□□□□□ -0.29
LRFN1-201ENST00000248668 ETFRF1Q6IPR1 90 aa13.21□□□□□ -0.29
LRFN1-201ENST00000248668 KDF1Q8NAX2 398 aaPredicted RBP13.21□□□□□ -0.29
LRFN1-201ENST00000248668 CD300LFQ8TDQ1 290 aa13.21□□□□□ -0.29
LRFN1-201ENST00000248668 RBMXL1Q96E39 390 aaKnown RBP13.21□□□□□ -0.29
LRFN1-201ENST00000248668 FAM215AQ9Y5M1 114 aa13.21□□□□□ -0.29
LRFN1-201ENST00000248668 MMP24Q9Y5R2 645 aa13.21□□□□□ -0.29
LRFN1-201ENST00000248668 KALRNO60229 2985 aa13.21□□□□□ -0.29
LRFN1-201ENST00000248668 SPRY3O43610 288 aa13.21□□□□□ -0.29
LRFN1-201ENST00000248668 GFI1BQ5VTD9 330 aa13.21□□□□□ -0.29
LRFN1-201ENST00000248668 NINJ1Q92982 152 aa13.21□□□□□ -0.29
LRFN1-201ENST00000248668 C5orf30Q96GV9 206 aa13.21□□□□□ -0.29
LRFN1-201ENST00000248668 BMP5P22003 454 aa13.21□□□□□ -0.3
LRFN1-201ENST00000248668 G6PCP35575 357 aa13.21□□□□□ -0.3
LRFN1-201ENST00000248668 RAB5CP51148 216 aa13.21□□□□□ -0.3
LRFN1-201ENST00000248668 SPINK9Q5DT21 86 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms