RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 BTNL3Q6UXE8 466 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 ZNF738Q8NE65 137 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 OR2Y1Q8NGV0 311 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 OR2V1Q8NHB1 315 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 CLDND2Q8NHS1 167 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 MRGPRFQ96AM1 343 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 ANGPTL4Q9BY76 406 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 GPR27Q9NS67 375 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 CISD1Q9NZ45 108 aaKnown RBP9.91□□□□□ -0.82
SOX9-201ENST00000245479 K7ESF4 209 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 ARL6IP6Q8N6S5 226 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 DEFB108BQ8NET1 73 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 LYZL4Q96KX0 146 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 P2RX4Q99571 388 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 PARLQ9H300 379 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 PRDM13Q9H4Q3 707 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 TECTAO75443 2155 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 LNP1A1A4G5 178 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 VAMP5O95183 116 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 CER1O95813 267 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 GZMBP10144 247 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 HOXC12P31275 282 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 WNT5AP41221 380 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 CEBPDP49716 269 aaPredicted RBP9.91□□□□□ -0.82
SOX9-201ENST00000245479 SERF2P84101 59 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 HLA-DRB5Q30154 266 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 CALHM1Q8IU99 346 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 C22orf15Q8WYQ4 148 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 DNASE2BQ8WZ79 361 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 CLDN23Q96B33 292 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 MANBALQ9NQG1 85 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 ABI3Q9P2A4 366 aa9.91□□□□□ -0.82
SOX9-201ENST00000245479 IGHV3-43A0A0B4J1X8 118 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 PINLYPA6NC86 204 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 A8MWP6 167 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 ZIC3O60481 467 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 IGHV3-43DP0DP04 118 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 MPLP40238 635 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 TCL1AP56279 114 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 SPEM2Q0P670 501 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 OR1C1Q15619 314 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 C1orf210Q8IVY1 113 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 BEND2Q8NDZ0 799 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 OR4A16Q8NH70 328 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 SIGLEC12Q96PQ1 595 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 TWSG1Q9GZX9 223 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 HIPK2Q9H2X6 1198 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 SDF2L1Q9HCN8 221 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 CTXND1A0A1B0GTU2 59 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 A0A1B0GU03 582 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 LDLRAD4O15165 306 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 AGFG2O95081 481 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 PAFAH1B2P68402 229 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 KMT5CQ86Y97 462 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 DEPPQ9NTK1 212 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 RPH3ALQ9UNE2 315 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 ZGRF1Q86YA3 2104 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 NXPH2O95156 264 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 OR4A8P0C604 315 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 OR5G3P0C626 314 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 EGR1P18146 543 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 EXT1Q16394 746 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 PMS2CLQ68D20 193 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 DNM1P46Q6ZS02 220 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 B4GALT7Q9UBV7 327 aa9.9□□□□□ -0.82
SOX9-201ENST00000245479 IGHV1-45A0A0A0MS14 117 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 KBTBD11O94819 623 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 NTF4P34130 210 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 SUMO3P55854 103 aaPredicted RBP9.89□□□□□ -0.83
SOX9-201ENST00000245479 UBE2NP61088 152 aaKnown RBP9.89□□□□□ -0.83
SOX9-201ENST00000245479 EIF3IQ13347 325 aaKnown RBP9.89□□□□□ -0.83
SOX9-201ENST00000245479 OR8G5Q8NG78 346 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 RCC1LQ96I51 464 aaKnown RBP9.89□□□□□ -0.83
SOX9-201ENST00000245479 PARD6GQ9BYG4 376 aaPredicted RBP9.89□□□□□ -0.83
SOX9-201ENST00000245479 PPP1R14DQ9NXH3 145 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 SCTP09683 121 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 COX6A1P12074 109 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 BCL3P20749 454 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 S100A7P31151 101 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 THBS3P49746 956 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 RAC1P63000 192 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 SPATA45Q537H7 98 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 PRAMEF5Q5TYX0 476 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 PRAMEF6Q5VXH4 476 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 STUMQ69YW2 141 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 SLC25A47Q6Q0C1 308 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 OR10V1Q8NGI7 309 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 MOB3AQ96BX8 217 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 TMEM204Q9BSN7 226 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 TMEM208Q9BTX3 173 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 OR2J1Q9GZK6 312 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 EML5Q05BV3 1969 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 OR7C2O60412 319 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 PSG2P11465 335 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 MRPL49Q13405 166 aaKnown RBP9.89□□□□□ -0.83
SOX9-201ENST00000245479 OR1L6Q8NGR2 347 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 ABHD5Q8WTS1 349 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 OIT3Q8WWZ8 545 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 HS3ST6Q96QI5 342 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 GNG12Q9UBI6 72 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms