RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 LY86O95711 162 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 IFNA7P01567 189 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 GYPAP02724 150 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 OR8U9P0C7N5 309 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 SSTR5P35346 364 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 TMEM33P57088 247 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 LOXL3P58215 753 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 CLEC12BQ2HXU8 276 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 MORN2Q502X0 79 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 THOC7Q6I9Y2 204 aaKnown RBP10.9□□□□□ -0.66
SLIRP-201ENST00000238688 PRIMA1Q86XR5 153 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 DRAM1Q8N682 238 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 OR8U1Q8NH10 309 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 RAB1CQ92928 201 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 WDR89Q96FK6 387 aaPredicted RBP10.9□□□□□ -0.66
SLIRP-201ENST00000238688 TP53RKQ96S44 253 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 CCL13Q99616 98 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 MFFQ9GZY8 342 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 PLEKHA2Q9HB19 425 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 GFOD1Q9NXC2 390 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 COA4Q9NYJ1 87 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 MIOXQ9UGB7 285 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 KCNS2Q9ULS6 477 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 TRAV14DV4A0A0A6YYC5 116 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 CCSO14618 274 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 HSD17B6O14756 317 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 ADAM20O43506 726 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 ADAP1O75689 374 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 RP2O75695 350 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 IGLV2-14P01704 120 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 HOXB5P09067 269 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 DAOP14920 347 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 RPL31P62899 125 aaKnown RBP10.89□□□□□ -0.67
SLIRP-201ENST00000238688 TAGLNQ01995 201 aaKnown RBP10.89□□□□□ -0.67
SLIRP-201ENST00000238688 EIF4EBP1Q13541 118 aaPredicted RBP10.89□□□□□ -0.67
SLIRP-201ENST00000238688 NMSQ5H8A3 153 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 TMEM268Q5VZI3 342 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 FAM71F2Q6NXP2 309 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 HEPN1Q6WQI6 88 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 SLC51BQ86UW2 128 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 KCNRGQ8N5I3 272 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 FAM71E2Q8N5Q1 922 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 MAPK1IP1LQ8NDC0 245 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 AQP10Q96PS8 301 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 AGMATQ9BSE5 352 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 OR2D2Q9H210 308 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 CHODLQ9H9P2 273 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 IDI2-AS1Q9NZ38 188 aa10.89□□□□□ -0.67
SLIRP-201ENST00000238688 RPUSD1Q9UJJ7 312 aaKnown RBP10.89□□□□□ -0.67
SLIRP-201ENST00000238688 A0A096LNT2 108 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 FAM90A9PA6NNJ1 464 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 INAFM1C9JVW0 142 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 FAM90A26D6RGX4 464 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 E5RGE8 158 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 RNF223E7ERA6 249 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 TAAR5O14804 337 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 ARPC5O15511 151 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 ST8SIA3O43173 380 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 ZNF205O95201 554 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 IGHV2-70P01814 119 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 PVALBP20472 110 aaPredicted RBP10.88□□□□□ -0.67
SLIRP-201ENST00000238688 GPR12P47775 334 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 EIF5AP63241 154 aaKnown RBP10.88□□□□□ -0.67
SLIRP-201ENST00000238688 OPCMLQ14982 345 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 Q5BKY6 102 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 SELENOHQ8IZQ5 122 aaKnown RBP10.88□□□□□ -0.67
SLIRP-201ENST00000238688 FAM216BQ8N7L0 139 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 SLC35G3Q8N808 338 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 DEFB108BQ8NET1 73 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 C8orf46Q8TAG6 207 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 TNFRSF14Q92956 283 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 SEC22AQ96IW7 307 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 OR10C1Q96KK4 312 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 ZNF714Q96N38 554 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 REG4Q9BYZ8 158 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 MBD2Q9UBB5 411 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 NSG2Q9Y328 171 aa10.88□□□□□ -0.67
SLIRP-201ENST00000238688 TRAV39A0A0B4J263 110 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 hCG_1809904A0A1W2PP81 198 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 A0A1W2PPE2 198 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 KANTRA0A1W2PQU2 76 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 A0A1W2PR64 198 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 A0A1W2PRV1 198 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 RAB29O14966 203 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 DEDDO75618 318 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 SCAF4O95104 1147 aaKnown RBP10.87□□□□□ -0.67
SLIRP-201ENST00000238688 NDUFB7P17568 137 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 PPP1CCP36873 323 aaKnown RBP10.87□□□□□ -0.67
SLIRP-201ENST00000238688 AP2S1P53680 142 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-201ENST00000238688 IFITM2Q01629 132 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 GNMTQ14749 295 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 C17orf58Q2M2W7 97 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 FAM201AQ5SY85 155 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 GPR157Q5UAW9 335 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 TEX261Q6UWH6 196 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 TMUB2Q71RG4 321 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 LYZL2Q7Z4W2 148 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 ZCCHC24Q8N2G6 241 aaKnown RBP10.87□□□□□ -0.67
SLIRP-201ENST00000238688 OR52L2PQ8NGH6 319 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 RRNAD1Q96FB5 475 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms