RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 RAE1P78406 368 aaKnown RBP11.53□□□□□ -0.56
NEK9-201ENST00000238616 SCMH1Q96GD3 660 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 HSPB7Q9UBY9 170 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 OPN4Q9UHM6 478 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 GAGE10A6NGK3 116 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 GZMHP20718 246 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 NKG7Q16617 165 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 MGAMO43451 1857 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 IGHV3-49A0A0A0MS15 119 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 GAPDHP04406 335 aaKnown RBP11.53□□□□□ -0.56
NEK9-201ENST00000238616 PRDX2P32119 198 aa11.53□□□□□ -0.56
NEK9-201ENST00000238616 NCOA6Q14686 2063 aaPredicted RBP11.53□□□□□ -0.56
NEK9-201ENST00000238616 PLPP2O43688 288 aa11.52□□□□□ -0.56
NEK9-201ENST00000238616 HYPMO75409 117 aa11.52□□□□□ -0.56
NEK9-201ENST00000238616 FAM106AQ4KMX7 169 aa11.52□□□□□ -0.56
NEK9-201ENST00000238616 ALS2Q96Q42 1657 aa11.52□□□□□ -0.56
NEK9-201ENST00000238616 VWA8A3KMH1 1905 aa11.52□□□□□ -0.56
NEK9-201ENST00000238616 PRR32B1ATL7 298 aa11.52□□□□□ -0.56
NEK9-201ENST00000238616 CYB5R3P00387 301 aaPredicted RBP11.52□□□□□ -0.56
NEK9-201ENST00000238616 PLP1P60201 277 aa11.52□□□□□ -0.56
NEK9-201ENST00000238616 ARF6P62330 175 aa11.52□□□□□ -0.56
NEK9-201ENST00000238616 TCF21O43680 179 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 PPYP01298 95 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 ACVR1Q04771 509 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 OR2Y1Q8NGV0 311 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 IGLV3-27P01718 113 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 NUBPLQ8TB37 319 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 LEAP2Q969E1 77 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 FAM60AQ9NP50 221 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 TMEM229AB2RXF0 380 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 VSIG10L2P0DP72 767 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 HLA-DRB3P79483 266 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 OR8D4Q8NGM9 314 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 UBR3Q6ZT12 1888 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 TMEM131Q92545 1883 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 NDUFB6O95139 128 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 LHFPL5Q8TAF8 219 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 TNRC6CQ9HCJ0 1690 aaKnown RBP11.52□□□□□ -0.57
NEK9-201ENST00000238616 S1PR2O95136 353 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 SMIM18P0DKX4 95 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 C10orf128Q5T292 105 aa11.52□□□□□ -0.57
NEK9-201ENST00000238616 TICRRQ7Z2Z1 1910 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 IL20Q9NYY1 176 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 MFAP4P55083 255 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 TMEM50BP56557 158 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 STPG1Q5TH74 334 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 STPG3Q8N7X2 389 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 GMPPAQ96IJ6 420 aaPredicted RBP11.51□□□□□ -0.57
NEK9-201ENST00000238616 ZNF488Q96MN9 340 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 TMEFF2Q9UIK5 374 aaPredicted RBP11.51□□□□□ -0.57
NEK9-201ENST00000238616 TEX30Q5JUR7 227 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 VGLL1Q99990 258 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 FLRT3Q9NZU0 649 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 MGAT2Q10469 447 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 IL24Q13007 206 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 TDGF1P13385 188 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 LINC01555Q8NAE3 123 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 HDHD3Q9BSH5 251 aaPredicted RBP11.51□□□□□ -0.57
NEK9-201ENST00000238616 NPFFR1Q9GZQ6 430 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 NKX2-6A6NCS4 301 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 B4DEV8 164 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 ZNF324BQ6AW86 544 aaPredicted RBP11.51□□□□□ -0.57
NEK9-201ENST00000238616 VKORC1L1Q8N0U8 176 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 SLC17A5Q9NRA2 495 aa11.51□□□□□ -0.57
NEK9-201ENST00000238616 HRKO00198 91 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 FABP2P12104 132 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 SLC16A13Q7RTY0 426 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 PGLYRP3Q96LB9 341 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 OR2H1Q9GZK4 316 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 RCC2Q9P258 522 aaKnown RBP11.5□□□□□ -0.57
NEK9-201ENST00000238616 OR2A4O95047 310 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 ANOS1P23352 680 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 ZNF770Q6IQ21 691 aaPredicted RBP11.5□□□□□ -0.57
NEK9-201ENST00000238616 YIPF6Q96EC8 236 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 OR2A7Q96R45 310 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 COL9A1P20849 921 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 AWAT1Q58HT5 328 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 FAM159AQ6UWV7 190 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 CEP192Q8TEP8 1941 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 MAP1LC3AQ9H492 121 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 SLC6A13Q9NSD5 602 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 PAPPAQ13219 1627 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 PRR19A6NJB7 356 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 LYZL2Q7Z4W2 148 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 LSM10Q969L4 123 aaKnown RBP11.5□□□□□ -0.57
NEK9-201ENST00000238616 HCFC1P51610 2035 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.5□□□□□ -0.57
NEK9-201ENST00000238616 A0A1B0GV72 72 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 GFRA3O60609 400 aa11.5□□□□□ -0.57
NEK9-201ENST00000238616 SAA1P0DJI8 122 aaPredicted RBP11.5□□□□□ -0.57
NEK9-201ENST00000238616 SHANK3Q9BYB0 1731 aa11.49□□□□□ -0.57
NEK9-201ENST00000238616 SPATA45Q537H7 98 aa11.49□□□□□ -0.57
NEK9-201ENST00000238616 FBXW9Q5XUX1 488 aa11.49□□□□□ -0.57
NEK9-201ENST00000238616 NUTF2P61970 127 aaKnown RBP11.49□□□□□ -0.57
NEK9-201ENST00000238616 DCAF12L2Q5VW00 463 aa11.49□□□□□ -0.57
NEK9-201ENST00000238616 PET117Q6UWS5 81 aa11.49□□□□□ -0.57
NEK9-201ENST00000238616 SHISA5Q8N114 240 aa11.49□□□□□ -0.57
NEK9-201ENST00000238616 DUX3Q96PT4 197 aa11.49□□□□□ -0.57
NEK9-201ENST00000238616 TTTY12Q9BZ98 90 aa11.49□□□□□ -0.57
NEK9-201ENST00000238616 IGHV3OR16-13A0A075B7E8 117 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms