RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 IGLV3-1P01715 115 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 PSG4Q00888 419 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 OR10G4Q8NGN3 311 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 BCL2L2Q92843 193 aaPredicted RBP12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 WDFY4Q6ZS81 3184 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 PAGE4O60829 102 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 RBMXL2O75526 392 aaKnown RBP12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 CD27P26842 260 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 SPINK9Q5DT21 86 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 TEX43Q6ZNM6 134 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 OR4B1Q8NGF8 309 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 RNF2Q99496 336 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 SRXN1Q9BYN0 137 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 CACNA1EQ15878 2313 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 CTSSP25774 331 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 THBS3P49746 956 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 FUT6P51993 359 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 ZNF90Q03938 601 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 OR56B2PQ8NGI1 322 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 PLPPR1Q8TBJ4 325 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 ANAPC16Q96DE5 110 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 WDYHV1Q96HA8 205 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 P2RX4Q99571 388 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 DMDP11532 3685 aa12.05□□□□□ -0.48
PCDHB3-201ENST00000231130 PGLYRP1O75594 196 aaPredicted RBP12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 PIAS2O75928 621 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 OTX2P32243 289 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 OR4A47Q6IF82 309 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 MRGPRDQ8TDS7 321 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 GSX1Q9H4S2 264 aaPredicted RBP12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 FSCN3Q9NQT6 498 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 PLSCR2Q9NRY7 297 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 GPR27Q9NS67 375 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 COX11Q9Y6N1 276 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 F2Z2F3 143 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 CLDN1O95832 211 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 PAFAH1B2P68402 229 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 EIF3IQ13347 325 aaKnown RBP12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 KIAA1644Q3SXP7 199 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 NMSQ5H8A3 153 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 TMEM211Q6ICI0 200 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 PRR27Q6MZM9 219 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 RHBDD2Q6NTF9 364 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 AAED1Q7RTV5 226 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 MRPL52Q86TS9 123 aaKnown RBP12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 TMEM56Q96MV1 263 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 CRIM1Q9NZV1 1036 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 TMEM56-RWDD3S4R434 201 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 CXCL13O43927 109 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 TUSC2O75896 110 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 PSG1P11464 419 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 KITLGP21583 273 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 VASH2Q86V25 355 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 SLC25A45Q8N413 288 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 ZIC4Q8N9L1 334 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 OR4C12Q96R67 309 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 C11orf1Q9H5F2 150 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 IL19Q9UHD0 177 aa12.04□□□□□ -0.48
PCDHB3-201ENST00000231130 FCN1O00602 326 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 RAB29O14966 203 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 OTX1P32242 354 aaPredicted RBP12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 SRYQ05066 204 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 BAXQ07812 192 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 FAM27BQ5VT28 67 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 WFDC8Q8IUA0 241 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 IGKV1-6A0A0C4DH72 117 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 A0A1W2PR77 199 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 C2CD4DB7Z1M9 353 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 SYNGR3O43761 229 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 HYPMO75409 117 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 C20orf204Q6ZNR8 217 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 OR10V1Q8NGI7 309 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 TMEM204Q9BSN7 226 aa12.03□□□□□ -0.48
PCDHB3-201ENST00000231130 SYNGR2O43760 224 aa12.02□□□□□ -0.48
PCDHB3-201ENST00000231130 C1QTNF9P0C862 333 aa12.02□□□□□ -0.48
PCDHB3-201ENST00000231130 TNFSF4P23510 183 aa12.02□□□□□ -0.48
PCDHB3-201ENST00000231130 OCIAD2Q56VL3 154 aa12.02□□□□□ -0.48
PCDHB3-201ENST00000231130 SLC35D1Q9NTN3 355 aa12.02□□□□□ -0.48
PCDHB3-201ENST00000231130 CHCHD2Q9Y6H1 151 aaPredicted RBP12.02□□□□□ -0.48
PCDHB3-201ENST00000231130 COL4A2P08572 1712 aa12.02□□□□□ -0.48
PCDHB3-201ENST00000231130 MDFIC2A0A1B0GVS7 189 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 SYNGR1O43759 233 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 F2RP25116 425 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 S100GP29377 79 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 SRP14P37108 136 aaKnown RBP12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 MPLP40238 635 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 CST9LQ9H4G1 147 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 ZNF430Q9H8G1 570 aaPredicted RBP12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 OR1A1Q9P1Q5 309 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 FBXL7Q9UJT9 491 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 RARRES3Q9UL19 164 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 RNF115Q9Y4L5 304 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 PI4KAP42356 2102 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 GLB1P16278 677 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 UCP1P25874 307 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 IER3P46695 156 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 C10orf128Q5T292 105 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 C16orf54Q6UWD8 224 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 FOXB1Q99853 325 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 NCOR1P1Q9H4R4 102 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms