RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TMEM251Q8N6I4 163 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 FAM216AQ8WUB2 273 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 CCL17Q92583 94 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 ZDHHC16Q969W1 377 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 SARAFQ96BY9 339 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 HSPB9Q9BQS6 159 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 CLDN16Q9Y5I7 305 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 MKI67P46013 3256 aaKnown RBP11.76□□□□□ -0.53
NFKB1-201ENST00000226574 FREM1Q5H8C1 2179 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 CNN1P51911 297 aaKnown RBP11.76□□□□□ -0.53
NFKB1-201ENST00000226574 ATP1A1-AS1Q5TC04 95 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 GALNT14Q96FL9 552 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 POM121L2Q96KW2 1035 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 IL36GQ9NZH8 169 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 WNT5AP41221 380 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 RHOBP62745 196 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 SERF2P84101 59 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 Q6ZN92 141 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 GINS3Q9BRX5 216 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 LOC102723971A0A1B0GUV8 181 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 E9PLN8 166 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 S1PR2O95136 353 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 CD1BP29016 333 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 MOGAT3Q86VF5 341 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 ARHGAP21Q5T5U3 1957 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 A0A1W2PRD5 423 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 A0A1W2PRF3 423 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 A0A1W2PRM7 423 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 SLC31A2O15432 143 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 NDUFS6O75380 124 aaKnown RBP11.75□□□□□ -0.53
NFKB1-201ENST00000226574 TGIF2LXQ8IUE1 241 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 NHLRC2Q8NBF2 726 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 OR1P1Q8NH06 330 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 MRPS11P82912 194 aaKnown RBP11.75□□□□□ -0.53
NFKB1-201ENST00000226574 PAX5Q02548 391 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 FXYD3Q14802 87 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 CPEB3Q8NE35 698 aaKnown RBP11.75□□□□□ -0.53
NFKB1-201ENST00000226574 OR51G1Q8NGK1 321 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 HIF1ANQ9NWT6 349 aa11.75□□□□□ -0.53
NFKB1-201ENST00000226574 PGPEP1LA6NFU8 196 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 CT45A6P0DMU7 189 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 CT45A5P0DMU8 189 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 CT45A7P0DMV0 189 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 SSTR5P35346 364 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 SCGB2A2Q13296 93 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 CT45A1Q5HYN5 189 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 DRAM1Q8N682 238 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 DEFB123Q8N688 67 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 BMPERQ8N8U9 685 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 NFAM1Q8NET5 270 aaPredicted RBP11.74□□□□□ -0.53
NFKB1-201ENST00000226574 CT45A3Q8NHU0 189 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 MISP3Q96FF7 219 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 DCTN5Q9BTE1 182 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 TTTY12Q9BZ98 90 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 HES4Q9HCC6 221 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 FNDC1Q4ZHG4 1894 aaPredicted RBP11.74□□□□□ -0.53
NFKB1-201ENST00000226574 TMPRSS2O15393 492 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 CXCL1P09341 107 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 COX6A1P12074 109 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 HOXA6P31267 233 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 UBE2L3P68036 154 aaKnown RBP11.74□□□□□ -0.53
NFKB1-201ENST00000226574 DCAF10Q5QP82 559 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 ATOH7Q8N100 152 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 OR5AU1Q8NGC0 362 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 CORO2AQ92828 525 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 AUP1Q9Y679 476 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 CLPSP04118 112 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 CHRNB4P30926 498 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 FBXW9Q5XUX1 488 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 OR1L6Q8NGR2 347 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 TM2D1Q9BX74 207 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 VSIRQ9H7M9 311 aa11.74□□□□□ -0.53
NFKB1-201ENST00000226574 DBX1A6NMT0 343 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 ATP6V1FQ16864 119 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 TMEM183BQ1AE95 376 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 KDF1Q8NAX2 398 aaPredicted RBP11.73□□□□□ -0.53
NFKB1-201ENST00000226574 SMDT1Q9H4I9 107 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 GLRX2Q9NS18 164 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 DENND4CQ5VZ89 1909 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 hCG_38984A0A1B0GV85 526 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 NPIPB13A6NJU9 1138 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 NPIPB4C9JG80 1138 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 SYNGR3O43761 229 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 HIST1H2BKO60814 126 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 CD5P06127 495 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 HIST1H2BJP06899 126 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 HIST1H2BOP23527 126 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 HIST1H2BBP33778 126 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 HIST1H2BDP58876 126 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 HIST1H2BCP62807 126 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 HIST2H2BEQ16778 126 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.73□□□□□ -0.53
NFKB1-201ENST00000226574 HIST1H2BHQ93079 126 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 STARD4Q96DR4 205 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 IMMP2LQ96T52 175 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 HIST1H2BNQ99877 126 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 HIST1H2BMQ99879 126 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 SH2D2AQ9NP31 389 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 DMRT1Q9Y5R6 373 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 GATCO43716 136 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms