RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 LY86O95711 162 aa13.07□□□□□ -0.32
SMN2-216ENST00000638794 NAPSAO96009 420 aa13.07□□□□□ -0.32
SMN2-216ENST00000638794 GABPB1Q06547 395 aaPredicted RBP13.07□□□□□ -0.32
SMN2-216ENST00000638794 RPL39P5Q59GN2 51 aa13.07□□□□□ -0.32
SMN2-216ENST00000638794 C19orf54Q5BKX5 351 aa13.07□□□□□ -0.32
SMN2-216ENST00000638794 C1orf100Q5SVJ3 147 aa13.07□□□□□ -0.32
SMN2-216ENST00000638794 GLT8D1Q68CQ7 371 aa13.07□□□□□ -0.32
SMN2-216ENST00000638794 TMED9Q9BVK6 235 aa13.07□□□□□ -0.32
SMN2-216ENST00000638794 PARP12Q9H0J9 701 aaKnown RBP13.07□□□□□ -0.32
SMN2-216ENST00000638794 ALX4Q9H161 411 aaPredicted RBP13.07□□□□□ -0.32
SMN2-216ENST00000638794 FBXL15Q9H469 300 aa13.07□□□□□ -0.32
SMN2-216ENST00000638794 PIPOXQ9P0Z9 390 aa13.07□□□□□ -0.32
SMN2-216ENST00000638794 SLC23A1Q9UHI7 598 aa13.07□□□□□ -0.32
SMN2-216ENST00000638794 A0A1W2PN81 502 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 CT45A6P0DMU7 189 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 CT45A5P0DMU8 189 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 CT45A7P0DMV0 189 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 CHRNA7P36544 502 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 ZNF880Q6PDB4 577 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 GLDNQ6ZMI3 551 aaPredicted RBP13.06□□□□□ -0.32
SMN2-216ENST00000638794 MS4A15Q8N5U1 240 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 KCNG3Q8TAE7 436 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 SETD6Q8TBK2 473 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 CASTOR1Q8WTX7 329 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 PHYHIPQ92561 330 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 DCUN1D4Q92564 292 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 TM2D1Q9BX74 207 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 CHMP1AQ9HD42 196 aaPredicted RBP13.06□□□□□ -0.32
SMN2-216ENST00000638794 ISYNA1Q9NPH2 558 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 A3GALT2U3KPV4 340 aa13.06□□□□□ -0.32
SMN2-216ENST00000638794 DYNC2H1Q8NCM8 4307 aaKnown RBP13.05□□□□□ -0.32
SMN2-216ENST00000638794 A0A0A6YYD4 124 aa13.05□□□□□ -0.32
SMN2-216ENST00000638794 OR5H14A6NHG9 310 aa13.05□□□□□ -0.32
SMN2-216ENST00000638794 RRHO14718 337 aa13.05□□□□□ -0.32
SMN2-216ENST00000638794 OVOL1O14753 267 aa13.05□□□□□ -0.32
SMN2-216ENST00000638794 RAB29O14966 203 aa13.05□□□□□ -0.32
SMN2-216ENST00000638794 SLC22A1O15245 554 aa13.05□□□□□ -0.32
SMN2-216ENST00000638794 CRIP2P52943 208 aaPredicted RBP13.05□□□□□ -0.32
SMN2-216ENST00000638794 QRFPP83859 136 aa13.05□□□□□ -0.32
SMN2-216ENST00000638794 OGFRL1Q5TC84 451 aaPredicted RBP13.05□□□□□ -0.32
SMN2-216ENST00000638794 ZNF660Q6AZW8 331 aaPredicted RBP13.05□□□□□ -0.32
SMN2-216ENST00000638794 ZNF429Q86V71 674 aa13.05□□□□□ -0.32
SMN2-216ENST00000638794 ABHD14BQ96IU4 210 aa13.05□□□□□ -0.32
SMN2-216ENST00000638794 MND1Q9BWT6 205 aa13.05□□□□□ -0.32
SMN2-216ENST00000638794 TOLLIPQ9H0E2 274 aa13.05□□□□□ -0.32
SMN2-216ENST00000638794 FOXA2Q9Y261 457 aaPredicted RBP13.05□□□□□ -0.32
SMN2-216ENST00000638794 SMAD5-AS1Q9Y6J3 95 aa13.05□□□□□ -0.32
SMN2-216ENST00000638794 TMEM14DPA8MWL7 114 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 H0YJW9 148 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 FCN1O00602 326 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 CDK1P06493 297 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 SRMP19623 302 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 SLURP1P55000 103 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 CX3CL1P78423 397 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 PLGLAQ15195 96 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 HSD17B12Q53GQ0 312 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 RNLSQ5VYX0 342 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 MOB1BQ7L9L4 216 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 CEACAM19Q7Z692 300 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 DLX4Q92988 240 aaPredicted RBP13.04□□□□□ -0.32
SMN2-216ENST00000638794 AGMATQ9BSE5 352 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 HDHD3Q9BSH5 251 aaPredicted RBP13.04□□□□□ -0.32
SMN2-216ENST00000638794 PLEKHJ1Q9NW61 149 aa13.04□□□□□ -0.32
SMN2-216ENST00000638794 LSM2Q9Y333 95 aaKnown RBP13.04□□□□□ -0.32
SMN2-216ENST00000638794 IGHV4OR15-8A0A075B7B6 117 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 A0A087WW49 117 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 LINC01619G3V211 115 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 H7C2Y5 167 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 SAP30O75446 220 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 BPNT1O95861 308 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 GSTP1P09211 210 aaKnown RBP13.03□□□□□ -0.32
SMN2-216ENST00000638794 LGALS1P09382 135 aaKnown RBP13.03□□□□□ -0.32
SMN2-216ENST00000638794 CD37P11049 281 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 EGR2P11161 476 aaPredicted RBP13.03□□□□□ -0.32
SMN2-216ENST00000638794 TCTEX1D1Q8N7M0 179 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 ABHD5Q8WTS1 349 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 LPAR5Q9H1C0 372 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 TPSG1Q9NRR2 321 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 OR1A1Q9P1Q5 309 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 AK3Q9UIJ7 227 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 GAB2Q9UQC2 676 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 WASHC3Q9Y3C0 194 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 NUBP2Q9Y5Y2 271 aa13.03□□□□□ -0.32
SMN2-216ENST00000638794 TRBV6-6A0A0A6YYG2 114 aa13.02□□□□□ -0.33
SMN2-216ENST00000638794 PTGES3LE9PB15 166 aa13.02□□□□□ -0.33
SMN2-216ENST00000638794 ITGB1BP1O14713 200 aa13.02□□□□□ -0.33
SMN2-216ENST00000638794 CASQ2O14958 399 aaPredicted RBP13.02□□□□□ -0.33
SMN2-216ENST00000638794 SOCS1O15524 211 aa13.02□□□□□ -0.33
SMN2-216ENST00000638794 UCHL1P09936 223 aa13.02□□□□□ -0.33
SMN2-216ENST00000638794 SNRPBP14678 240 aaKnown RBP13.02□□□□□ -0.33
SMN2-216ENST00000638794 MC5RP33032 325 aa13.02□□□□□ -0.33
SMN2-216ENST00000638794 HLA-DRB3P79483 266 aa13.02□□□□□ -0.33
SMN2-216ENST00000638794 SPHARQ15513 63 aa13.02□□□□□ -0.33
SMN2-216ENST00000638794 OR5AN1Q8NGI8 311 aa13.02□□□□□ -0.33
SMN2-216ENST00000638794 OR6M1Q8NGM8 313 aa13.02□□□□□ -0.33
SMN2-216ENST00000638794 FAM103A1Q9BTL3 118 aaKnown RBP13.02□□□□□ -0.33
SMN2-216ENST00000638794 C11orf54Q9H0W9 315 aaPredicted RBP13.02□□□□□ -0.33
SMN2-216ENST00000638794 RIMS4Q9H426 269 aaPredicted RBP13.02□□□□□ -0.33
SMN2-216ENST00000638794 RBBP9O75884 186 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 SPNP16150 400 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms