RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 C14orf79Q96F83 325 aa16.33■□□□□ 0.21
TREX1-205ENST00000625293 GAFA1Q96PS6 74 aa16.33■□□□□ 0.21
TREX1-205ENST00000625293 AGMATQ9BSE5 352 aa16.33■□□□□ 0.21
TREX1-205ENST00000625293 ARV1Q9H2C2 271 aa16.33■□□□□ 0.21
TREX1-205ENST00000625293 DUX4Q9UBX2 424 aa16.33■□□□□ 0.21
TREX1-205ENST00000625293 IGHV3-43A0A0B4J1X8 118 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 A8MXK9 166 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 F2RL2O00254 374 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 JTBO76095 146 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 IGHV3-43DP0DP04 118 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 SELLP14151 372 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 MMP9P14780 707 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 TNFRSF1AP19438 455 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 RPL30P62888 115 aaKnown RBP16.33■□□□□ 0.2
TREX1-205ENST00000625293 Q6ZRM9 215 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 UBAC2Q8NBM4 344 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 ESRP2Q9H6T0 727 aaKnown RBP16.33■□□□□ 0.2
TREX1-205ENST00000625293 WFDC1Q9HC57 220 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 DCAF16Q9NXF7 216 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 JPT1Q9UK76 154 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 RNF115Q9Y4L5 304 aa16.33■□□□□ 0.2
TREX1-205ENST00000625293 LRRK2Q5S007 2527 aa16.32■□□□□ 0.2
TREX1-205ENST00000625293 KIAA2026Q5HYC2 2103 aa16.32■□□□□ 0.2
TREX1-205ENST00000625293 MEX3AA1L020 520 aaKnown RBP16.32■□□□□ 0.2
TREX1-205ENST00000625293 DUX4L9Q6RFH8 374 aaPredicted RBP16.32■□□□□ 0.2
TREX1-205ENST00000625293 CLEC9AQ6UXN8 241 aa16.32■□□□□ 0.2
TREX1-205ENST00000625293 ZNF788Q6ZQV5 615 aa16.32■□□□□ 0.2
TREX1-205ENST00000625293 OR2C3Q8N628 320 aa16.32■□□□□ 0.2
TREX1-205ENST00000625293 FAM216AQ8WUB2 273 aa16.32■□□□□ 0.2
TREX1-205ENST00000625293 SMIM3Q9BZL3 60 aa16.32■□□□□ 0.2
TREX1-205ENST00000625293 DIDO1Q9BTC0 2240 aaKnown RBP16.32■□□□□ 0.2
TREX1-205ENST00000625293 E7EQL1 145 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 TMEM50AO95807 157 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 MUC1P15941 1255 aaPredicted RBP16.31■□□□□ 0.2
TREX1-205ENST00000625293 CHRNB4P30926 498 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 LOXL3P58215 753 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 CCL8P80075 99 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 EWSR1Q01844 656 aaKnown RBP eCLIP16.31■□□□□ 0.2
TREX1-205ENST00000625293 FAM209AQ5JX71 171 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 RNF141Q8WVD5 230 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 RNASE6Q93091 150 aaKnown RBP16.31■□□□□ 0.2
TREX1-205ENST00000625293 MAGT1Q9H0U3 335 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 FAM234AQ9H0X4 552 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 LYRM2Q9NU23 88 aaPredicted RBP16.31■□□□□ 0.2
TREX1-205ENST00000625293 OR6C3Q9NZP0 311 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 TEX46H3BTG2 121 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 CCL21O00585 134 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 SSSCA1O60232 199 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 IRF2P14316 349 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 ZNF16P17020 682 aaPredicted RBP16.31■□□□□ 0.2
TREX1-205ENST00000625293 PVALBP20472 110 aaPredicted RBP16.31■□□□□ 0.2
TREX1-205ENST00000625293 BRWD1-AS2P59051 145 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 NHLH2Q02577 135 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 ODF3L1Q8IXM7 274 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 ZNF808Q8N4W9 903 aaPredicted RBP16.31■□□□□ 0.2
TREX1-205ENST00000625293 PLPPR2Q96GM1 343 aa16.31■□□□□ 0.2
TREX1-205ENST00000625293 FAM212BQ9NTI7 297 aaPredicted RBP16.31■□□□□ 0.2
TREX1-205ENST00000625293 DOPEY2Q9Y3R5 2298 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 IGSF23A1L1A6 192 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 FAM24AA6NFZ4 105 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 VSTM5A8MXK1 200 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 YPEL1O60688 119 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 EDDM3BP56851 147 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 ADORA2A-AS1P86434 159 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 IZUMO4Q1ZYL8 232 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 C17orf58Q2M2W7 97 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 MORN2Q502X0 79 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 YPEL2Q96QA6 119 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 ZNF665Q9H7R5 613 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 CALYQ9NYX4 217 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 PLA2G2EQ9NZK7 142 aa16.3■□□□□ 0.2
TREX1-205ENST00000625293 DEFB108AA8MXU0 73 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 SHOXO15266 292 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 SIGLEC5O15389 551 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 ST8SIA5O15466 376 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 P0C879 139 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 EPHA1P21709 976 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 LPAR6P43657 344 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 PAX9P55771 341 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 EIF5AL1Q6IS14 154 aaKnown RBP16.29■□□□□ 0.2
TREX1-205ENST00000625293 ZNF66Q6ZN08 573 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 TCF23Q7RTU1 214 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 ZNF295-AS1Q8N0V1 137 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 ZCCHC24Q8N2G6 241 aaKnown RBP16.29■□□□□ 0.2
TREX1-205ENST00000625293 TCTEX1D1Q8N7M0 179 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 EDARADDQ8WWZ3 215 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 CCL13Q99616 98 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 CACNG5Q9UF02 275 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 PSG11Q9UQ72 335 aa16.29■□□□□ 0.2
TREX1-205ENST00000625293 PCNX1Q96RV3 2341 aa16.28■□□□□ 0.2
TREX1-205ENST00000625293 FAM90A27PA6NNH2 459 aa16.28■□□□□ 0.2
TREX1-205ENST00000625293 RAMP3O60896 148 aa16.28■□□□□ 0.2
TREX1-205ENST00000625293 GYPAP02724 150 aa16.28■□□□□ 0.2
TREX1-205ENST00000625293 CATR1Q13166 79 aa16.28■□□□□ 0.2
TREX1-205ENST00000625293 SWI5Q1ZZU3 235 aa16.28■□□□□ 0.2
TREX1-205ENST00000625293 TMEM252Q8N6L7 170 aa16.28■□□□□ 0.2
TREX1-205ENST00000625293 DEFB108BQ8NET1 73 aa16.28■□□□□ 0.2
TREX1-205ENST00000625293 OR1S2Q8NGQ3 325 aa16.28■□□□□ 0.2
TREX1-205ENST00000625293 NEUROG1Q92886 237 aa16.28■□□□□ 0.2
TREX1-205ENST00000625293 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms