RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 SLC23A3Q6PIS1 610 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 CLN8Q9UBY8 286 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 DEFB108AA8MXU0 73 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 NDUFS8O00217 210 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 TNFSF10P50591 281 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 GUCD1Q96NT3 240 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 IL36GQ9NZH8 169 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 RALGAPA1Q6GYQ0 2036 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 IGHV3-64DA0A0J9YX35 117 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 CISD3P0C7P0 127 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 PTPRFP10586 1907 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 FHITP49789 147 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 C6orf15Q6UXA7 325 aaPredicted RBP7.75□□□□□ -1.17
VCL-206ENST00000623461 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.75□□□□□ -1.17
VCL-206ENST00000623461 ANKRD37Q7Z713 158 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 GBGT1Q8N5D6 347 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 TMEM14DPA8MWL7 114 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 DNPH1O43598 174 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 RELBQ01201 579 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 MRGPRDQ8TDS7 321 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 KISS1RQ969F8 398 aaPredicted RBP7.74□□□□□ -1.17
VCL-206ENST00000623461 F5P12259 2224 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 DLEU1O43261 78 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 S1PR2O95136 353 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 MRPL37Q9BZE1 423 aaKnown RBP7.74□□□□□ -1.17
VCL-206ENST00000623461 ZNF256Q9Y2P7 627 aaPredicted RBP7.74□□□□□ -1.17
VCL-206ENST00000623461 MSGN1A6NI15 193 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 GZMHP20718 246 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 SPTY2D1-AS1A0A0U1RR47 76 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 HIST1H2BKO60814 126 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 HIST1H2BJP06899 126 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 HIST1H2BOP23527 126 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 HIST1H2BBP33778 126 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 HIST1H2BDP58876 126 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 HIST1H2BCP62807 126 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 HIST2H2BEQ16778 126 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.74□□□□□ -1.17
VCL-206ENST00000623461 PQLC2Q6ZP29 291 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 HIST3H2BBQ8N257 126 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 HIST1H2BHQ93079 126 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 HIST1H2BNQ99877 126 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 HIST1H2BMQ99879 126 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 PAXXQ9BUH6 204 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 TMEM242Q9NWH2 141 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 IL36BQ9NZH7 164 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 PROCRQ9UNN8 238 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 A0A1W2PPC4 97 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 GRIFINA4D1Z8 144 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 J3QT63 122 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 FBLN7Q53RD9 439 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 SPATA46Q5T0L3 261 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 MMD2Q8IY49 270 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 OR4X1Q8NH49 305 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 CLDND2Q8NHS1 167 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 GPR146Q96CH1 333 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 KLF4O43474 513 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 CD5P06127 495 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 GCSHP23434 173 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 OR10AG1Q8NH19 301 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 WFDC6Q9BQY6 131 aa7.74□□□□□ -1.17
VCL-206ENST00000623461 CENPVL1A0A0U1RR11 272 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 PGLYRP1O75594 196 aaPredicted RBP7.73□□□□□ -1.17
VCL-206ENST00000623461 EML2O95834 649 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 METAP1P53582 386 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 DEFB108BQ8NET1 73 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 OR2M3Q8NG83 312 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 OR2Y1Q8NGV0 311 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 GPBAR1Q8TDU6 330 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 FAM206AQ9NX38 181 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 ZNF205O95201 554 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 NGFRP08138 427 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 ERGP11308 486 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 OR10D3Q8NH80 312 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 KCNS1Q96KK3 526 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 IGLV1-36A0A0B4J1U3 117 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 A0A1W2PR80 420 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 DLX1P56177 255 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 RAC3P60763 192 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 HSPB7Q9UBY9 170 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 MBD1Q9UIS9 605 aaPredicted RBP7.73□□□□□ -1.17
VCL-206ENST00000623461 NRXN2Q9P2S2 1712 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 A1L4Q6 167 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 LIPFP07098 398 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 ZNF137PP52743 207 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 RFESDQ8TAC1 157 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 RAB37Q96AX2 223 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 C19orf24Q9BVV8 132 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 CLEC1BQ9P126 229 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 SIP14410 1827 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 PRSS53Q2L4Q9 553 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 STAG3L3P0CL85 134 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 CTGFP29279 349 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 SRD5A2P31213 254 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 MAS1LP35410 378 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 FGF12P61328 243 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 LYZP61626 148 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 SRSF3P84103 164 aaKnown RBP7.73□□□□□ -1.17
VCL-206ENST00000623461 LRRC10Q5BKY1 277 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 GTF3AQ92664 365 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms