RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SDSLQ96GA7 329 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 SF3B5Q9BWJ5 86 aaKnown RBP11.97□□□□□ -0.49
LDB3-209ENST00000623056 TMEM9BQ9NQ34 198 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 PXMP4Q9Y6I8 212 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 MLNRO43193 412 aa11.96□□□□□ -0.49
LDB3-209ENST00000623056 IRF2P14316 349 aa11.96□□□□□ -0.49
LDB3-209ENST00000623056 NPPCP23582 126 aa11.96□□□□□ -0.49
LDB3-209ENST00000623056 CEACAM16Q2WEN9 425 aa11.96□□□□□ -0.49
LDB3-209ENST00000623056 TMEM144Q7Z5S9 345 aa11.96□□□□□ -0.49
LDB3-209ENST00000623056 LRP11Q86VZ4 500 aa11.96□□□□□ -0.49
LDB3-209ENST00000623056 WDYHV1Q96HA8 205 aa11.96□□□□□ -0.49
LDB3-209ENST00000623056 C1QTNF5Q9BXJ0 243 aa11.96□□□□□ -0.49
LDB3-209ENST00000623056 OR1A1Q9P1Q5 309 aa11.96□□□□□ -0.49
LDB3-209ENST00000623056 PPP1R3CQ9UQK1 317 aa11.96□□□□□ -0.49
LDB3-209ENST00000623056 CBY1Q9Y3M2 126 aa11.96□□□□□ -0.49
LDB3-209ENST00000623056 TRAPPC2LH3BP13 241 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 PPP1CBP62140 327 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 RAC1P63000 192 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 C21orf62-AS1Q17RA5 79 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 ZNF585BQ52M93 769 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 TMEM14EPQ6UXP3 125 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 AAED1Q7RTV5 226 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 IL1F10Q8WWZ1 152 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 RIMS4Q9H426 269 aaPredicted RBP11.95□□□□□ -0.5
LDB3-209ENST00000623056 PROK2Q9HC23 129 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 C19orf25Q9UFG5 118 aaPredicted RBP11.95□□□□□ -0.5
LDB3-209ENST00000623056 CABIN1Q9Y6J0 2220 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 SDK2Q58EX2 2172 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 HS3ST1O14792 307 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 CLDN1O95832 211 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 CRYABP02511 175 aaKnown RBP11.95□□□□□ -0.5
LDB3-209ENST00000623056 ZNF16P17020 682 aaPredicted RBP11.95□□□□□ -0.5
LDB3-209ENST00000623056 PCBD1P61457 104 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 LINC01551Q86U37 167 aa11.95□□□□□ -0.5
LDB3-209ENST00000623056 MYPOPQ86VE0 399 aaPredicted RBP11.95□□□□□ -0.5
LDB3-209ENST00000623056 MRPS18CQ9Y3D5 142 aaKnown RBP11.95□□□□□ -0.5
LDB3-209ENST00000623056 TRBV6-6A0A0A6YYG2 114 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 LRP5LA4QPB2 252 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 ZNHIT1O43257 154 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 YPEL1O60688 119 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 CD33P20138 364 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 PMP22Q01453 160 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 FFAR4Q5NUL3 377 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 TOMM20LQ6UXN7 152 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 MKXQ8IYA7 352 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 CPEB3Q8NE35 698 aaKnown RBP11.94□□□□□ -0.5
LDB3-209ENST00000623056 RDH5Q92781 318 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 HLA-CQ95604 372 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 YPEL2Q96QA6 119 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 C20orf144Q9BQM9 153 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 MIEN1Q9BRT3 115 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 PRDM14Q9GZV8 571 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 PARD6AQ9NPB6 346 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 AURKAIP1Q9NWT8 199 aaPredicted RBP11.94□□□□□ -0.5
LDB3-209ENST00000623056 C11orf94C9JXX5 98 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 SYNGR1O43759 233 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 CD99P14209 185 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 MPLP40238 635 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 TDRG1Q3Y452 100 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 SLC25A45Q8N413 288 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 CMTM2Q8TAZ6 248 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 PSMF1Q92530 271 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 GPR35Q9HC97 309 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 CFAP54Q96N23 3096 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 SDK1Q7Z5N4 2213 aa11.94□□□□□ -0.5
LDB3-209ENST00000623056 WDR87Q6ZQQ6 2873 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 TRAV24A0A0B4J272 114 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 ZNF716A6NP11 495 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 TNFSF13O75888 250 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 LINC00614P0C842 121 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 RAC3P60763 192 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 UBE2NP61088 152 aaKnown RBP11.93□□□□□ -0.5
LDB3-209ENST00000623056 CEACAM21Q3KPI0 293 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 ARSJQ5FYB0 599 aaPredicted RBP11.93□□□□□ -0.5
LDB3-209ENST00000623056 Q6ZWC4 215 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 WDFY3Q8IZQ1 3526 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 BTF3L4Q96K17 158 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 ZNF488Q96MN9 340 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 DIRC2Q96SL1 478 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 LPAR2Q9HBW0 351 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 TMEM106BQ9NUM4 274 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 LIN7CQ9NUP9 197 aaKnown RBP11.93□□□□□ -0.5
LDB3-209ENST00000623056 TMEM265A0A087WTH1 108 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 DEFA4P12838 97 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 EGR1P18146 543 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 COX5AP20674 150 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 BRS3P32247 399 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 ADMP35318 185 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 SOX8P57073 446 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 TFF3Q07654 80 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 COLCA1Q6ZS62 124 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 TCF23Q7RTU1 214 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 TMEM147Q9BVK8 224 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 AKIRIN1Q9H9L7 192 aaPredicted RBP11.93□□□□□ -0.5
LDB3-209ENST00000623056 KCNS2Q9ULS6 477 aa11.93□□□□□ -0.5
LDB3-209ENST00000623056 TRAV39A0A0B4J263 110 aa11.92□□□□□ -0.5
LDB3-209ENST00000623056 GJE1A6NN92 205 aa11.92□□□□□ -0.5
LDB3-209ENST00000623056 FAM90A26D6RGX4 464 aa11.92□□□□□ -0.5
LDB3-209ENST00000623056 C3orf80F5H4A9 247 aa11.92□□□□□ -0.5
LDB3-209ENST00000623056 DEGS1O15121 323 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 208.2 ms