RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 SNRPCP09234 159 aaKnown RBP7.92□□□□□ -1.14
GGA3-223ENST00000621870 RPL27AP46776 148 aaKnown RBP7.92□□□□□ -1.14
GGA3-223ENST00000621870 ZNF90Q03938 601 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 AARDQ4LEZ3 155 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 OR1B1Q8NGR6 318 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 VKORC1Q9BQB6 163 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 ZNF426Q9BUY5 554 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 TMEM106BQ9NUM4 274 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 SPRR3Q9UBC9 169 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 RNF24Q9Y225 148 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 ANKRD11Q6UB99 2663 aaPredicted RBP7.91□□□□□ -1.14
GGA3-223ENST00000621870 ZNF705GA8MUZ8 300 aaPredicted RBP7.91□□□□□ -1.14
GGA3-223ENST00000621870 PPP5D1E7EU14 171 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 CST4P01036 141 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 HLA-DQB1P01920 261 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 LIPFP07098 398 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 PAX6P26367 422 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 FOXG1P55316 489 aaPredicted RBP7.91□□□□□ -1.14
GGA3-223ENST00000621870 TMEM33P57088 247 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 RPL7L1Q6DKI1 246 aaKnown RBP7.91□□□□□ -1.14
GGA3-223ENST00000621870 WFDC3Q8IUB2 231 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 TCTE3Q8IZS6 198 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 OR4D10Q8NGI6 311 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 KPTNQ9Y664 436 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 FANCMQ8IYD8 2048 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 SERTM2A0A1B0GWG4 89 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 CHEK1O14757 476 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 SLC25A17O43808 307 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 SLC25A5P05141 298 aaKnown RBP7.91□□□□□ -1.14
GGA3-223ENST00000621870 DAOP14920 347 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 NDUFA6P56556 154 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 ABHD12Q8N2K0 398 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 PNKDQ8N490 385 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 V9GYH0 126 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 V9GYS6 101 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 SETD2Q9BYW2 2564 aaPredicted RBP7.91□□□□□ -1.14
GGA3-223ENST00000621870 NYNRINQ9P2P1 1898 aaKnown RBP7.91□□□□□ -1.14
GGA3-223ENST00000621870 DHRS7CA6NNS2 312 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 IFNL4K9M1U5 179 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 FOXH1O75593 365 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 RHBDL1O75783 438 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 RAB5CP51148 216 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 NHLH1Q02575 133 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 C1orf100Q5SVJ3 147 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 HCP5Q6MZN7 132 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 PRSS54Q6PEW0 395 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 ZBTB34Q8NCN2 500 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 ADAD2Q8NCV1 583 aaKnown RBP7.91□□□□□ -1.14
GGA3-223ENST00000621870 OR5R1Q8NH85 324 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 LILRB1Q8NHL6 650 aaPredicted RBP7.91□□□□□ -1.14
GGA3-223ENST00000621870 PTX4Q96A99 478 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 NTNG2Q96CW9 530 aa7.91□□□□□ -1.14
GGA3-223ENST00000621870 MAP1LC3B2A6NCE7 125 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 CTDSPLO15194 276 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 PLA2G10O15496 165 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 FAM106CPP0CH98 169 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 LCN2P80188 198 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 FAM78BQ5VT40 261 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 NCR3LG1Q68D85 454 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 SSX7Q7RTT5 188 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 C1orf162Q8NEQ5 155 aaPredicted RBP7.9□□□□□ -1.14
GGA3-223ENST00000621870 FAM131CQ96AQ9 280 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 MAP1LC3BQ9GZQ8 125 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 RCC2Q9P258 522 aaKnown RBP7.9□□□□□ -1.14
GGA3-223ENST00000621870 PITPNC1Q9UKF7 332 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 XKRY2A2RUG3 117 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 LYNX1G3V0Z9 82 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 J3KRW8 73 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 GSTZ1O43708 216 aaPredicted RBP7.9□□□□□ -1.14
GGA3-223ENST00000621870 LYNX1P0DP58 116 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 PAX5Q02548 391 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 Q0VFX4 171 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 PJVKQ0ZLH3 352 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 KIAA0141Q14154 515 aaPredicted RBP7.9□□□□□ -1.14
GGA3-223ENST00000621870 ZNF79Q15937 498 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 BTNL8Q6UX41 500 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 GCSAMQ8N6F7 178 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 FAM216BQ8N7L0 139 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 DYNLRB2Q8TF09 96 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 Q8WTZ3 238 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 FAM168AQ92567 244 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 ASCL3Q9NQ33 180 aa7.9□□□□□ -1.14
GGA3-223ENST00000621870 NPIPB7O75200 414 aa7.9□□□□□ -1.15
GGA3-223ENST00000621870 MC5RP33032 325 aa7.9□□□□□ -1.15
GGA3-223ENST00000621870 SSTR5P35346 364 aa7.9□□□□□ -1.15
GGA3-223ENST00000621870 CDC34P49427 236 aaPredicted RBP7.9□□□□□ -1.15
GGA3-223ENST00000621870 UBE2L3P68036 154 aaKnown RBP7.9□□□□□ -1.15
GGA3-223ENST00000621870 TMEM255AQ5JRV8 349 aa7.9□□□□□ -1.15
GGA3-223ENST00000621870 BTF3L4Q96K17 158 aa7.9□□□□□ -1.15
GGA3-223ENST00000621870 P2RX4Q99571 388 aa7.9□□□□□ -1.15
GGA3-223ENST00000621870 NAGKQ9UJ70 344 aa7.9□□□□□ -1.15
GGA3-223ENST00000621870 ELF5Q9UKW6 265 aaPredicted RBP7.9□□□□□ -1.15
GGA3-223ENST00000621870 MRPS18CQ9Y3D5 142 aaKnown RBP7.9□□□□□ -1.15
GGA3-223ENST00000621870 MGAMO43451 1857 aa7.9□□□□□ -1.15
GGA3-223ENST00000621870 A0A1W2PPQ1 181 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 J3QW42 95 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 IGHMP01871 453 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 CD1AP06126 327 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 SPP1P10451 314 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 CTRB1P17538 263 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms