RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 GLT8D1Q68CQ7 371 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 TMUB2Q71RG4 321 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 KRT77Q7Z794 578 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 ZNF573Q86YE8 665 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 SLC38A6Q8IZM9 456 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 BATF2Q8N1L9 274 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 OR11H6Q8NGC7 330 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 OR13C8Q8NGS7 320 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 SUN5Q8TC36 379 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 MRGPRFQ96AM1 343 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 GPR61Q9BZJ8 451 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 HHLA2Q9UM44 414 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 DHDHQ9UQ10 334 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 PIGLQ9Y2B2 252 aa6.26□□□□□ -1.41
CLK1-215ENST00000621181 DSCAML1Q8TD84 2053 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 A0A0U1RQV5 110 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 TMEM269A0A1B0GVZ9 245 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 LOC107986453A0A1B0GWG9 222 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 J3QT63 122 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 K7N7A8 449 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 L7N2F9 121 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 RAB27BO00194 218 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 RBP4P02753 201 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 PGA5P0DJD9 388 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 RAB6AP20340 208 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 C4BPBP20851 252 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 S100A11P31949 105 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 TAS2R19P59542 299 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 MOGAT2Q3SYC2 334 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 ABCA11PQ4W5N1 156 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 MINOS1Q5TGZ0 78 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 RNF144BQ7Z419 303 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 OR4D6Q8NGJ1 314 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 LRRC20Q8TCA0 184 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 RBPMSQ93062 196 aaKnown RBP6.25□□□□□ -1.41
CLK1-215ENST00000621181 ZNF714Q96N38 554 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 SLC25A21Q9BQT8 299 aaPredicted RBP6.25□□□□□ -1.41
CLK1-215ENST00000621181 TINAGL1Q9GZM7 467 aaPredicted RBP6.25□□□□□ -1.41
CLK1-215ENST00000621181 ATG5Q9H1Y0 275 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 FAM206AQ9NX38 181 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 SLC2A8Q9NY64 477 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 OR52A1Q9UKL2 312 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 TMA7Q9Y2S6 64 aaKnown RBP6.25□□□□□ -1.41
CLK1-215ENST00000621181 MINOS1-NBL1R4GNA1 71 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 UBE2QL1A1L167 161 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 MEIS3P1A6NDR6 274 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 I3L521 148 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 SCO1O75880 301 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 CD2P06729 351 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 CHRM2P08172 466 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 RPA2P15927 270 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 HLA-GP17693 338 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 DLX6P56179 175 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 ACTBP60709 375 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 UBE2MP61081 183 aaKnown RBP6.25□□□□□ -1.41
CLK1-215ENST00000621181 COL10A1Q03692 680 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 EDDM3AQ14507 147 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 ZNF260Q3ZCT1 412 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 ZNF660Q6AZW8 331 aaPredicted RBP6.25□□□□□ -1.41
CLK1-215ENST00000621181 C16orf82Q7Z2V1 217 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 OR51E1Q8TCB6 317 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 SCARB1Q8WTV0 552 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 NRIP2Q9BQI9 281 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 GPR84Q9NQS5 396 aa6.25□□□□□ -1.41
CLK1-215ENST00000621181 IGHV2-26A0A0B4J1V2 119 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 TMEM82A0PJX8 343 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 FAM90A22PA8MWA6 464 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 GOSR2O14653 212 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 RAB3DO95716 219 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 TTRP02766 147 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 RLN1P04808 185 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 FGF2P09038 288 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 OR4E1P0C645 316 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 CD24P25063 80 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 HTR1DP28221 377 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 ARHGDIBP52566 201 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 RAB14P61106 215 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 UNC119Q13432 240 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 TMEM244Q5VVB8 128 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 OR10K2Q6IF99 312 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 C10orf99Q6UWK7 81 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 OVCH2Q7RTZ1 564 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 EIF4E3Q8N5X7 224 aaKnown RBP6.24□□□□□ -1.41
CLK1-215ENST00000621181 NKAIN3Q8N8D7 197 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 LINC00482Q8N8I6 264 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 CXorf58Q96LI9 332 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 CLEC7AQ9BXN2 247 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 PBOV1Q9GZY1 135 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 SDHAF2Q9NX18 166 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 CKLFQ9UBR5 152 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 ANAPC10Q9UM13 185 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 GTF2A1LQ9UNN4 478 aa6.24□□□□□ -1.41
CLK1-215ENST00000621181 hADV38S2A0JD32 116 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 M0QYG6 137 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 ARPC5O15511 151 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 DHRS3O75911 302 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 UBCP0CG48 685 aaKnown RBP6.23□□□□□ -1.41
CLK1-215ENST00000621181 ZP3P21754 424 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 ZBTB25P24278 435 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 LMO1P25800 156 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms