RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 GZMBP10144 247 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 COX5AP20674 150 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 FGF7P21781 194 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 GPR12P47775 334 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 KRTDAPP60985 99 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 IGFBP7Q16270 282 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 OR4D5Q8NGN0 318 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 BTF3L4Q96K17 158 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 FAM173AQ9BQD7 235 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 PCGF1Q9BSM1 259 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 ELOVL1Q9BW60 279 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 TM2D1Q9BX74 207 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 POLDIP2Q9Y2S7 368 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 TRDCB7Z8K6 153 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 EREGO14944 169 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 AMBPP02760 352 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 OR5G3P0C626 314 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 CA6P23280 308 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 RPL29P47914 159 aaKnown RBP5.97□□□□□ -1.45
NEDD9-216ENST00000620854 Q6ZPA2 131 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 ZNF441Q8N8Z8 693 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 M1APQ8TC57 530 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 SSC4DQ8WTU2 575 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 OIT3Q8WWZ8 545 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 TMEM18Q96B42 140 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 SARAFQ96BY9 339 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 CHRNA10Q9GZZ6 450 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 RAB9BQ9NP90 201 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 FUT9Q9Y231 359 aa5.97□□□□□ -1.45
NEDD9-216ENST00000620854 TRAV34A0A0B4J273 112 aa5.96□□□□□ -1.45
NEDD9-216ENST00000620854 PDCD6O75340 191 aa5.96□□□□□ -1.45
NEDD9-216ENST00000620854 EGR1P18146 543 aa5.96□□□□□ -1.45
NEDD9-216ENST00000620854 COL19A1Q14993 1142 aa5.96□□□□□ -1.45
NEDD9-216ENST00000620854 OR2V1Q8NHB1 315 aa5.96□□□□□ -1.45
NEDD9-216ENST00000620854 TMEM222Q9H0R3 208 aa5.96□□□□□ -1.45
NEDD9-216ENST00000620854 RBKSQ9H477 322 aa5.96□□□□□ -1.45
NEDD9-216ENST00000620854 ZNF331Q9NQX6 463 aaPredicted RBP5.96□□□□□ -1.45
NEDD9-216ENST00000620854 LYRM2Q9NU23 88 aaPredicted RBP5.96□□□□□ -1.45
NEDD9-216ENST00000620854 LIN7CQ9NUP9 197 aaKnown RBP5.96□□□□□ -1.45
NEDD9-216ENST00000620854 IGHV3-43A0A0B4J1X8 118 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 A0A0G2JRQ6 117 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 MAP1LC3B2A6NCE7 125 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 HSPB1P04792 205 aaKnown RBP5.96□□□□□ -1.46
NEDD9-216ENST00000620854 IGHV3-43DP0DP04 118 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 CD82P27701 267 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 FAM3BP58499 235 aaPredicted RBP5.96□□□□□ -1.46
NEDD9-216ENST00000620854 ZNF92Q03936 586 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 TIGITQ495A1 244 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 SSX7Q7RTT5 188 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 TMPRSS7Q7RTY8 843 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 SELENOHQ8IZQ5 122 aaKnown RBP5.96□□□□□ -1.46
NEDD9-216ENST00000620854 KDF1Q8NAX2 398 aaPredicted RBP5.96□□□□□ -1.46
NEDD9-216ENST00000620854 OR10A7Q8NGE5 316 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 MOB3AQ96BX8 217 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 MAP1LC3BQ9GZQ8 125 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 CLCF1Q9UBD9 225 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 FZR1Q9UM11 496 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 MUC6Q6W4X9 2439 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 F6UZH7 168 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 TOX4O94842 621 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 OPN1MWP04001 364 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 OR4A8P0C604 315 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 OPN1MW2P0DN77 364 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 OPN1MW3P0DN78 364 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 CCL1P22362 96 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 FAM90A2PQ658T7 463 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 GATAD1Q8WUU5 269 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 HIF1ANQ9NWT6 349 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 IL17BQ9UHF5 180 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 LTBP2Q14767 1821 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 PLCE1Q9P212 2302 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 ZFHX2Q9C0A1 2572 aaPredicted RBP5.96□□□□□ -1.46
NEDD9-216ENST00000620854 CPAMD8Q8IZJ3 1885 aa5.96□□□□□ -1.46
NEDD9-216ENST00000620854 PITX3O75364 302 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 CYC1P08574 325 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 ZNF506Q5JVG8 444 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 TOMM20LQ6UXN7 152 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 C16orf82Q7Z2V1 217 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 SLC35E3Q7Z769 313 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 ZNF488Q96MN9 340 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 GPR27Q9NS67 375 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 PITPNC1Q9UKF7 332 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 SSUH2Q9Y2M2 353 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 PCNX1Q96RV3 2341 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 ELOA3CA0A087WX78 387 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-216ENST00000620854 ZNF25P17030 456 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-216ENST00000620854 PMCHP20382 165 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 CEACAM6P40199 344 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 WNT5AP41221 380 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 MZT1Q08AG7 82 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 ACSM6Q6P461 480 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 ODF3L1Q8IXM7 274 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 OR5B3Q8NH48 314 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 Q9N2K0 584 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 A0A1B0GU03 582 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 C19orf67A6NJJ6 358 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 A8MWP6 167 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 PRRG2O14669 202 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 TGOLN2O43493 480 aa5.95□□□□□ -1.46
NEDD9-216ENST00000620854 PSG2P11465 335 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms