RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	DSP	P15924	2871 aa	Known RBP	12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	CHD3	Q12873	2000 aa	Known RBP	12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	UBE2L5P	A0A1B0GUS4	154 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	CYC1	P08574	325 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	GZMH	P20718	246 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	C21orf62-AS1	Q17RA5	79 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	TEX38	Q6PEX7	206 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	SSX7	Q7RTT5	188 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	MRPL41	Q8IXM3	137 aa	Known RBP	12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	TMEM105	Q8N8V8	129 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	OR10V1	Q8NGI7	309 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	ABHD14B	Q96IU4	210 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	VAX2	Q9UIW0	290 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	TRAV24	A0A0B4J272	114 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644		M0R143	59 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	CLDN1	O95832	211 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	ZNF726P1	Q15940	193 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	NCR3LG1	Q68D85	454 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	ZNF808	Q8N4W9	903 aa	Predicted RBP	12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	DLL3	Q9NYJ7	618 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	B4GALT7	Q9UBV7	327 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	RP1L1	Q8IWN7	2480 aa	Predicted RBP	12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	PPP5D1	E7EU14	171 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	SYNGR2	O43760	224 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	MB	P02144	154 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	GRP	P07492	148 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	IDH3G	P51553	393 aa	Predicted RBP	12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	GFRA1	P56159	465 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	CXorf67	Q86X51	503 aa	Predicted RBP	12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	PRSS50	Q9UI38	385 aa		12.28	□□□□□ -0.44
SMTN-223	ENST00000619644	NTN3	O00634	580 aa	Predicted RBP	12.27	□□□□□ -0.44
SMTN-223	ENST00000619644	TDGF1P3	P51864	188 aa		12.27	□□□□□ -0.44
SMTN-223	ENST00000619644	IQCJ	Q1A5X6	159 aa		12.27	□□□□□ -0.44
SMTN-223	ENST00000619644	KRTAP27-1	Q3LI81	207 aa		12.27	□□□□□ -0.44
SMTN-223	ENST00000619644	PCSK4	Q6UW60	755 aa		12.27	□□□□□ -0.44
SMTN-223	ENST00000619644	NUFIP2	Q7Z417	695 aa	Known RBP	12.27	□□□□□ -0.44
SMTN-223	ENST00000619644	OR2M7	Q8NG81	312 aa		12.27	□□□□□ -0.44
SMTN-223	ENST00000619644	TMEM18	Q96B42	140 aa		12.27	□□□□□ -0.44
SMTN-223	ENST00000619644	PYGO2	Q9BRQ0	406 aa		12.27	□□□□□ -0.44
SMTN-223	ENST00000619644	USF3	Q68DE3	2245 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	IFNL4	K9M1U5	179 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	LAMTOR5	O43504	91 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	KRAS	P01116	189 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	SERPINA7	P05543	415 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	NUBP1	P53384	320 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	GNG3	P63215	75 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	ZXDA	P98168	799 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	HOXA4	Q00056	320 aa	Predicted RBP	12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	ARL16	Q0P5N6	197 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	SPINK9	Q5DT21	86 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	ZNF573	Q86YE8	665 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	OR5A2	Q8NGI9	324 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	TMEM37	Q8WXS4	190 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	ACY3	Q96HD9	319 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	SMIM7	Q9BQ49	75 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	PRDM6	Q9NQX0	595 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	RNF115	Q9Y4L5	304 aa		12.27	□□□□□ -0.45
SMTN-223	ENST00000619644	CEBPD	P49716	269 aa	Predicted RBP	12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	PDLIM4	P50479	330 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	RPUSD4	Q96CM3	377 aa	Known RBP	12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	P2RX4	Q99571	388 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	ELOVL1	Q9BW60	279 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	RBKS	Q9H477	322 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	NAT8	Q9UHE5	227 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	ASPM	Q8IZT6	3477 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	MARCH11	A6NNE9	402 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	CER1	O95813	267 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	GALR1	P47211	349 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	ERVFC1-1	P60608	527 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	ZNF816	Q0VGE8	651 aa	Predicted RBP	12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	TRA2A	Q13595	282 aa	Known RBP eCLIP	12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	OR1C1	Q15619	314 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	OR51G1	Q8NGK1	321 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	TMEM170A	Q8WVE7	144 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	R3HDM4	Q96D70	268 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	WFIKKN1	Q96NZ8	548 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	PCGF1	Q9BSM1	259 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	DEFB127	Q9H1M4	99 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	FUT9	Q9Y231	359 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	NXPH2	O95156	264 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	SSPN	Q14714	243 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	ALKBH2	Q6NS38	261 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	COLCA1	Q6ZS62	124 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	TGIF2LY	Q8IUE0	185 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644	RAB40C	Q96S21	281 aa		12.26	□□□□□ -0.45
SMTN-223	ENST00000619644		A0A1W2PPQ1	181 aa		12.25	□□□□□ -0.45
SMTN-223	ENST00000619644	CLEC18A	A5D8T8	446 aa		12.25	□□□□□ -0.45
SMTN-223	ENST00000619644	FAM90A10P	A6NDY2	464 aa		12.25	□□□□□ -0.45
SMTN-223	ENST00000619644	FAM90A18P	A6NE21	464 aa		12.25	□□□□□ -0.45
SMTN-223	ENST00000619644	FAM90A16P	A6NEW6	464 aa		12.25	□□□□□ -0.45
SMTN-223	ENST00000619644	FAM90A20P	A6NIJ5	464 aa		12.25	□□□□□ -0.45
SMTN-223	ENST00000619644	FAM90A8P	A6NJQ4	464 aa		12.25	□□□□□ -0.45
SMTN-223	ENST00000619644	FAM90A7P	A6NKC0	464 aa		12.25	□□□□□ -0.45
SMTN-223	ENST00000619644	FAM90A22P	A8MWA6	464 aa		12.25	□□□□□ -0.45
SMTN-223	ENST00000619644	FAM90A12P	A8MX19	464 aa		12.25	□□□□□ -0.45
SMTN-223	ENST00000619644	FAM90A5P	A8MXJ8	464 aa		12.25	□□□□□ -0.45
SMTN-223	ENST00000619644	FAM90A23P	A8MXZ1	464 aa		12.25	□□□□□ -0.45
SMTN-223	ENST00000619644	CDIPT	O14735	213 aa		12.25	□□□□□ -0.45
SMTN-223	ENST00000619644	IGHE	P01854	428 aa		12.25	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms