RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 TPRX1Q8N7U7 411 aa10.09□□□□□ -0.79
CDH5-208ENST00000614547 ZNF501Q96CX3 271 aaPredicted RBP10.09□□□□□ -0.79
CDH5-208ENST00000614547 CTDSP1Q9GZU7 261 aa10.09□□□□□ -0.79
CDH5-208ENST00000614547 CISD1Q9NZ45 108 aaKnown RBP10.09□□□□□ -0.79
CDH5-208ENST00000614547 SPTBN4Q9H254 2564 aa10.09□□□□□ -0.79
CDH5-208ENST00000614547 GJE1A6NN92 205 aa10.09□□□□□ -0.79
CDH5-208ENST00000614547 SELEP16581 610 aa10.09□□□□□ -0.79
CDH5-208ENST00000614547 AMTP48728 403 aa10.09□□□□□ -0.79
CDH5-208ENST00000614547 RPL23P62829 140 aaKnown RBP10.09□□□□□ -0.79
CDH5-208ENST00000614547 FAM90A2PQ658T7 463 aa10.09□□□□□ -0.79
CDH5-208ENST00000614547 SSX7Q7RTT5 188 aa10.09□□□□□ -0.79
CDH5-208ENST00000614547 ST6GALNAC3Q8NDV1 305 aa10.09□□□□□ -0.79
CDH5-208ENST00000614547 TAF15Q92804 592 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDH5-208ENST00000614547 RAB24Q969Q5 203 aa10.09□□□□□ -0.79
CDH5-208ENST00000614547 RPH3ALQ9UNE2 315 aa10.09□□□□□ -0.79
CDH5-208ENST00000614547 RNF24Q9Y225 148 aa10.09□□□□□ -0.79
CDH5-208ENST00000614547 PPIAL4AQ9Y536 164 aa10.09□□□□□ -0.79
CDH5-208ENST00000614547 IGHV1OR15-9A0A0B4J2B8 117 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 A8MWP6 167 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 A8MXE2 369 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 SIAH2O43255 324 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 ZIC3O60481 467 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 SYNGR4O95473 234 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 CTXN2P0C2S0 81 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 GLB1P16278 677 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 CDC34P49427 236 aaPredicted RBP10.08□□□□□ -0.8
CDH5-208ENST00000614547 UCP3P55916 312 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 ZNF439Q8NDP4 499 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 FGFBP3Q8TAT2 258 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 SNHG12Q9BXW3 62 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 MRPL37Q9BZE1 423 aaKnown RBP10.08□□□□□ -0.8
CDH5-208ENST00000614547 OBP2BQ9NPH6 170 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 NCOR2Q9Y618 2525 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 GCGP01275 180 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 TPPP2P59282 170 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 PRR31Q5SQ13 230 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 TEX38Q6PEX7 206 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 SLC23A3Q6PIS1 610 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 MANBALQ9NQG1 85 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 FREM1Q5H8C1 2179 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 OR10J1P30954 320 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 ERVFC1-1P60608 527 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 OR10D3Q8NH80 312 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 RBM14Q96PK6 669 aaKnown RBP10.08□□□□□ -0.8
CDH5-208ENST00000614547 OR2H1Q9GZK4 316 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 TMEM9BQ9NQ34 198 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 NAT8BQ9UHF3 227 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 OR2W1Q9Y3N9 320 aa10.08□□□□□ -0.8
CDH5-208ENST00000614547 HPRT1P00492 218 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 NGFP01138 241 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 SUMO1P63165 101 aaKnown RBP10.07□□□□□ -0.8
CDH5-208ENST00000614547 CCL7P80098 99 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 ARL16Q0P5N6 197 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 SRXN1Q9BYN0 137 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 OR2D2Q9H210 308 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 C1QTNF9P0C862 333 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 SRFP11831 508 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 CEBPDP49716 269 aaPredicted RBP10.07□□□□□ -0.8
CDH5-208ENST00000614547 CFHR1Q03591 330 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 C3AR1Q16581 482 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 HES3Q5TGS1 186 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 RHBDD2Q6NTF9 364 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 Q6ZN92 141 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 MAFAQ8NHW3 353 aaPredicted RBP10.07□□□□□ -0.8
CDH5-208ENST00000614547 CCDC74BQ96LY2 380 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 TMEM38BQ9NVV0 291 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 TP53TG5Q9Y2B4 290 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 PRR14LQ5THK1 2151 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 CADP27708 2225 aa10.07□□□□□ -0.8
CDH5-208ENST00000614547 C17orf112F2Z3M2 114 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 SLC17A3O00476 420 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 KBTBD11O94819 623 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 CCKARP32238 428 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 FAM27BQ5VT28 67 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 Q6ZRM9 215 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 LINC00696Q6ZRV3 163 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 FAM58AQ8N1B3 248 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 LYPD6BQ8NI32 183 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 OIT3Q8WWZ8 545 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 TMEM68Q96MH6 324 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 LIN7CQ9NUP9 197 aaKnown RBP10.06□□□□□ -0.8
CDH5-208ENST00000614547 OCIAD1Q9NX40 245 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 ZNF586Q9NXT0 402 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 GNG12Q9UBI6 72 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 GZMHP20718 246 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 HNRNPA3P51991 378 aaKnown RBP10.06□□□□□ -0.8
CDH5-208ENST00000614547 TFF3Q07654 80 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 GCSAMLQ5JQS6 135 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 MRPL54Q6P161 138 aaKnown RBP10.06□□□□□ -0.8
CDH5-208ENST00000614547 ZDHHC16Q969W1 377 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 UHRF2Q96PU4 802 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 ENY2Q9NPA8 101 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 CHD8Q9HCK8 2581 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 ATP5G3P48201 142 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 TNFSF10P50591 281 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 PRAMEF5Q5TYX0 476 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 PRAMEF6Q5VXH4 476 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 C2orf88Q9BSF0 95 aa10.06□□□□□ -0.8
CDH5-208ENST00000614547 CLCF1Q9UBD9 225 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms