RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 OR8U9P0C7N5 309 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 GPR12P47775 334 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 INPP1P49441 399 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 ZNF134P52741 427 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 TAS2R19P59542 299 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 AP3S2P59780 193 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 DGCR2P98153 550 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 LRRC75BQ2VPJ9 315 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 LDLRAD3Q86YD5 345 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 TGIF2LXQ8IUE1 241 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 H1FOOQ8IZA3 346 aaPredicted RBP13.52□□□□□ -0.25
USHBP1-210ENST00000600286 OR8H3Q8N146 312 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 Q8N402 240 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 TMEM86BQ8N661 226 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 OR6F1Q8NGZ6 308 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 OR8U1Q8NH10 309 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 OR5R1Q8NH85 324 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 S100ZQ8WXG8 99 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 SNAPC3Q92966 411 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 PRDM13Q9H4Q3 707 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 KLK11Q9UBX7 282 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 OR2W1Q9Y3N9 320 aa13.52□□□□□ -0.25
USHBP1-210ENST00000600286 HSD17B6O14756 317 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 SLC31A2O15432 143 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 ST8SIA5O15466 376 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 NFYAP23511 347 aaPredicted RBP13.51□□□□□ -0.25
USHBP1-210ENST00000600286 FCGR2CP31995 323 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 HRH1P35367 487 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 HERV-K104P61576 105 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 RNASE10Q5GAN6 216 aaKnown RBP13.51□□□□□ -0.25
USHBP1-210ENST00000600286 UTF1Q5T230 341 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 FAM53AQ6NSI3 398 aaPredicted RBP13.51□□□□□ -0.25
USHBP1-210ENST00000600286 GDPD1Q8N9F7 314 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 TMEM229BQ8NBD8 167 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 GIMAP1Q8WWP7 306 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 BORCS5Q969J3 196 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 SSX3Q99909 188 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 THAP7Q9BT49 309 aaPredicted RBP13.51□□□□□ -0.25
USHBP1-210ENST00000600286 ZNRD1Q9P1U0 126 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 PITPNC1Q9UKF7 332 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 RNF150Q9ULK6 438 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 SOX21Q9Y651 276 aaPredicted RBP13.51□□□□□ -0.25
USHBP1-210ENST00000600286 POMT1Q9Y6A1 747 aa13.51□□□□□ -0.25
USHBP1-210ENST00000600286 MDFIC2A0A1B0GVS7 189 aa13.5□□□□□ -0.25
USHBP1-210ENST00000600286 LY6LH3BQJ8 138 aa13.5□□□□□ -0.25
USHBP1-210ENST00000600286 LANCL1O43813 399 aa13.5□□□□□ -0.25
USHBP1-210ENST00000600286 RFX2P48378 723 aa13.5□□□□□ -0.25
USHBP1-210ENST00000600286 ZNF816Q0VGE8 651 aaPredicted RBP13.5□□□□□ -0.25
USHBP1-210ENST00000600286 DYRK1AQ13627 763 aa13.5□□□□□ -0.25
USHBP1-210ENST00000600286 PLA1AQ53H76 456 aa13.5□□□□□ -0.25
USHBP1-210ENST00000600286 FAM71F2Q6NXP2 309 aa13.5□□□□□ -0.25
USHBP1-210ENST00000600286 OVCH2Q7RTZ1 564 aa13.5□□□□□ -0.25
USHBP1-210ENST00000600286 MOB3BQ86TA1 216 aa13.5□□□□□ -0.25
USHBP1-210ENST00000600286 LYSMD2Q8IV50 215 aa13.5□□□□□ -0.25
USHBP1-210ENST00000600286 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.5□□□□□ -0.25
USHBP1-210ENST00000600286 C17orf50Q8WW18 174 aa13.5□□□□□ -0.25
USHBP1-210ENST00000600286 V9GYH0 126 aa13.5□□□□□ -0.25
USHBP1-210ENST00000600286 VGLL3A8MV65 326 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 TRIM77I1YAP6 450 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 J3QRK9 145 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 HOXA3O43365 443 aaPredicted RBP13.49□□□□□ -0.25
USHBP1-210ENST00000600286 RAB3DO95716 219 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 FAM106CPP0CH98 169 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 FAUP35544 74 aaKnown RBP13.49□□□□□ -0.25
USHBP1-210ENST00000600286 IER3P46695 156 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 DYNLT3P51808 116 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 ZNF137PP52743 207 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 HILS1P60008 231 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 MEF2DQ14814 521 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 STEAP1BQ6NZ63 245 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 DHRS11Q6UWP2 260 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 CAPSLQ8WWF8 208 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 RTN4IP1Q8WWV3 396 aaPredicted RBP13.49□□□□□ -0.25
USHBP1-210ENST00000600286 ABHD14BQ96IU4 210 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 ZNF48Q96MX3 618 aaPredicted RBP13.49□□□□□ -0.25
USHBP1-210ENST00000600286 OR2D2Q9H210 308 aa13.49□□□□□ -0.25
USHBP1-210ENST00000600286 DISC1C4P0D8 188 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 H3BUX3 64 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 CD3DP04234 171 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 AKAIN1P0CW23 69 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 REG1BP48304 166 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 VAX1Q5SQQ9 334 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 TRIQKQ629K1 86 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 LPCAT3Q6P1A2 487 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 TOMM5Q8N4H5 51 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 ST6GALNAC6Q969X2 333 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 AJUBAQ96IF1 538 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 AGMATQ9BSE5 352 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 ZNF2Q9BSG1 426 aaPredicted RBP13.48□□□□□ -0.25
USHBP1-210ENST00000600286 PARP12Q9H0J9 701 aaKnown RBP13.48□□□□□ -0.25
USHBP1-210ENST00000600286 IFI27L2Q9H2X8 130 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 RAB18Q9NP72 206 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 TNFRSF19Q9NS68 423 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 GAB2Q9UQC2 676 aa13.48□□□□□ -0.25
USHBP1-210ENST00000600286 RBMX2Q9Y388 322 aaKnown RBP13.48□□□□□ -0.25
USHBP1-210ENST00000600286 SAA2-SAA4A0A096LPE2 208 aa13.47□□□□□ -0.25
USHBP1-210ENST00000600286 IGHV1-3A0A0C4DH29 117 aa13.47□□□□□ -0.25
USHBP1-210ENST00000600286 CLDN34H7C241 214 aa13.47□□□□□ -0.25
USHBP1-210ENST00000600286 TUSC2O75896 110 aa13.47□□□□□ -0.25
USHBP1-210ENST00000600286 PPYP01298 95 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms